Perognathus longimembris pacificus (Pacific pocket mouse): 125361201
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Entry
125361201 CDS
T08928
Symbol
Lgr5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125361201 (Lgr5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
plop04030
]
125361201 (Lgr5)
G protein-coupled receptors [BR:
plop04030
]
Rhodopsin family
Others
R-spondin
125361201 (Lgr5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
7tm_1
LRR_LRWD1
LRR_EndoS
LRR_R13L1-DRL21
LRRNT
Motif
Other DBs
NCBI-GeneID:
125361201
NCBI-ProteinID:
XP_048215406
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All DBs
Position
1:complement(35010052..35121825)
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AA seq
907 aa
AA seq
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MDTSRVGVLLSLPVLLQLAAGGGSPRSDALLRGCPMHCQCEPDGRMLLRVDCSDVGLSEL
PTNLSVFTSYLDLSMNNITQLLPNPLHSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLM
LQNNQLRQVPTEALQNLRNLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQ
ALRSLSALQAMTLALNKIHHIPDYAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLD
LNYNNLDEFPTAIRTLSNLKELGFHSNNIRSIPEKAFVGNPSLITIHFYDNPIQFVGRSA
FQHLPELRTLTLNGASQITVFPDLTGTANLESLTLTGAQISSLPQTVCDQLPNLQVLDLS
YNLLEDLPSFSACQKLQKIDLRHNRIYEIKVDTFQQLLSLRSLNLAWNKIAIIHPNAFST
LPSLIKLDLSSNLLSSFPVTGLHGLTHLKLTGNHALQSLISSENFPELKVIEMPYAYQCC
AFGVCENVYKISNQWTKGDNSSLDDLHRKDAGMFQVQDERDFEDFLLDFEEDLKALHSVQ
CSPSPGPFKPCEHLFGSWLIRMGVWTIAVLALSCNALVTFTVFRSALYLSSIKLLIGAMA
LVNLLMGISSAVLAVMDAFTFGSFAQHGAGWETGVGCQVIGFLSIFASESSVFLLTLAAL
ERGFSVKCSAKFEMKIPFSGLKVTILFCGLLALTIATVPLLGGSEYRASPFCLPLPFGES
STTGYMVALVLLNSVCFLIMTIAYTKLYCNLEKGDLETIWDCSMVKHVALLLFTNCILYC
PVAFLSFSSLLNLTFISPEVIKFILLVIVPLPACLNPLLYIVFNPHFKEDLGSLGKQTPL
WTKSKHPSLMSINSDDVEKQSCDSTQALVTFTRASIAYDLPSNSRSSPAYPMTESCHLSA
VTFVPCL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggacacctcccgcgtcggcgtgctcctgtccttgccggtgctgctgcagctggcggcc
gggggcggctcgcccaggtccgacgcgctgctgaggggctgccccatgcactgtcagtgc
gaacccgacggcaggatgttgctcagggtggattgctccgatgtggggctctcggagctg
cccaccaacctcagtgtcttcacctcctacctagacctcagtatgaacaacatcactcag
ctactcccgaaccccctgcacagcctccgcttcctcgaggagttacgtcttgctggaaat
gctttaacatacattcccaagggagcattcactggcctttacagtcttaaagttcttatg
ctacagaacaatcagctaagacaggtacccacggaagcgctacagaacttacgaaacctt
caatcgctacgtctggatgccaaccacatcagctacgtgccacccagctgcttcagtggc
ctacattccctgaggcacctgtggctggatgacaacgctctaacagaaatccctgtccag
gctctcagaagtttatcagcattgcaagccatgaccttggccctgaacaaaatacaccac
ataccagactatgcctttggaaacctctccagcttggtagttctccatctccataacaat
agaatccactccctgggaaagaaatgctttgatggactccacagcctagagactttagat
ttgaattataataatcttgatgaattccccactgcaatcaggacactctccaatcttaaa
gaactaggatttcatagtaacaatatcaggtccatacctgagaaagcatttgtaggaaac
ccttctcttataacaatacacttctatgacaaccccattcaatttgttggaagatctgcc
tttcaacatttacctgaactaagaacattaactttgaatggtgcctcacaaataacagta
tttcctgatttaactggaactgccaacctggagagtctgactttaactggagcacagatc
tcatctcttccccaaaccgtctgtgaccagttacctaatctccaagtgctagatctgtct
tacaacctattagaagatttacccagtttttcagcctgccaaaagcttcagaaaattgac
ctccgccataacagaatctatgaaattaaggttgacactttccagcagttgcttagcctc
cgatctctaaatttggcttggaataaaattgccattatccaccccaatgcattttccact
ttgccgtctctaataaaactggacctatcatccaatctcctgtcgtcttttcctgtaact
gggttacatggtttaactcacttaaaattaacaggaaatcatgccttacagagcttgata
tcatctgaaaactttccagagctcaaagttatagagatgccttatgcttaccagtgttgt
gcatttggggtgtgtgagaatgtctataaaatttctaatcagtggactaaaggagacaac
agcagtttggatgaccttcataggaaagatgctggaatgtttcaggttcaagatgagcgt
gactttgaagatttcctgcttgactttgaggaagacctaaaagcccttcattcagttcag
tgttctccttcaccaggccccttcaagccctgtgagcacttgtttggtagctggctgatc
cgaatgggagtgtggaccatagcggttctggcactttcttgcaatgccttggtgactttc
acggtgttccgatcggctctgtacctttcctctataaaactgttgattggggccatggcg
ctggtgaacctgctcatgggcatctccagcgccgtgctggcggtgatggacgccttcacc
ttcggcagcttcgcccagcatggtgcagggtgggaaacaggggtcggttgccaagtcatt
ggctttctgtccatttttgcttcggaatcctcggttttcctgcttactctggcagccctg
gaacgtgggttctctgtgaaatgttctgcaaaatttgaaatgaaaatccccttttctggc
ctgaaagtgaccatcttattctgtggcctgctagccctgaccatcgccacagttccccta
ctgggcggcagcgagtacagggcctccccgttttgcctgcctctgccctttggagagtcc
agcaccacaggttacatggtggcccttgtcttgctcaactctgtttgcttcctcatcatg
accattgcttacaccaagctctactgtaatttggagaaaggagatctggagactatctgg
gactgttctatggtgaaacacgttgccctgttgcttttcaccaactgtatcctctactgc
cctgtggctttcttatccttctcctctctgctaaacctcaccttcatcagtcctgaagta
attaagtttattctgctagtgattgtcccacttccggcctgtctcaacccccttctttac
atcgtcttcaatccccattttaaggaggatctggggagcctgggaaagcaaacccccttg
tggacgaaatcaaaacacccaagcctgatgtctattaattcggatgatgttgagaagcag
tcttgtgactcaacccaagctctggttaccttcacccgtgccagcatagcctatgacctg
ccttccaattccagatcatcaccagcttatccaatgactgaaagctgtcatctttcagcg
gtgacatttgtcccttgtctctaa
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