Perognathus longimembris pacificus (Pacific pocket mouse): 125361218
Help
Entry
125361218 CDS
T08928
Symbol
Irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04620
Toll-like receptor signaling pathway
plop04621
NOD-like receptor signaling pathway
plop04622
RIG-I-like receptor signaling pathway
plop04623
Cytosolic DNA-sensing pathway
plop05160
Hepatitis C
plop05161
Hepatitis B
plop05162
Measles
plop05164
Influenza A
plop05167
Kaposi sarcoma-associated herpesvirus infection
plop05168
Herpes simplex virus 1 infection
plop05169
Epstein-Barr virus infection
plop05203
Viral carcinogenesis
plop05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125361218 (Irf7)
04621 NOD-like receptor signaling pathway
125361218 (Irf7)
04622 RIG-I-like receptor signaling pathway
125361218 (Irf7)
04623 Cytosolic DNA-sensing pathway
125361218 (Irf7)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125361218 (Irf7)
09172 Infectious disease: viral
05161 Hepatitis B
125361218 (Irf7)
05160 Hepatitis C
125361218 (Irf7)
05164 Influenza A
125361218 (Irf7)
05162 Measles
125361218 (Irf7)
05168 Herpes simplex virus 1 infection
125361218 (Irf7)
05167 Kaposi sarcoma-associated herpesvirus infection
125361218 (Irf7)
05169 Epstein-Barr virus infection
125361218 (Irf7)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125361218 (Irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125361218 (Irf7)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
125361218 (Irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
125361218
NCBI-ProteinID:
XP_048215439
LinkDB
All DBs
Position
13:63370459..63373433
Genome browser
AA seq
463 aa
AA seq
DB search
MAAAQDRGPQRVLFGEWLLGEVSSGRYEGLQWLDETHKVFRVPWKHFARKDLGEADAHIF
KAWAVARGRWPPSSSDQPSPEAEAVERAGWKTNFRCALHSTRRFVMLKDNSGDPVDPHKI
YMLSSKPGCRASESPAVHQGEEEAFRGAPPAQGGAPGPLLTGPAEPQDLLLQVLQQSLVE
DHLLDAVLGGNSAPTQAPAPLWFLGPEHPSEEPVAAWTMEATPSPRPQHPVLMTEPGPGA
LDVTILYKGRIVLQAVVGHPSCVFLYNPTGPAALATEAQPVVFPSPAELPDQKQLRYTEE
LLRHVAPGLQLELRGLELWALRMGKCKVYWEVGSPQGFASPSTPAQLLERNCQTPIFDFS
NFFRELGEFRARRRQDSPHYTIYLGFGQDLSARRPKEKSLVLVKLEPRLCRVHVECVQRE
GVSSLDSSSLGLCLSSTNSLYDDIEHFLMTWNSGQKPASLSPQ
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagctcaggacaggggcccccagcgtgtgctgtttggggagtggcttctaggt
gaggtcagcagcggtcggtatgaggggcttcagtggctggatgagacccacaaggtgttc
cgtgtgccctggaagcactttgcgcgtaaggatctgggagaggccgatgcacacatcttc
aaggcctgggcagtggcccgaggcaggtggccacccagcagcagtgaccagccctcccca
gaagctgaggctgtggagcgtgctggctggaaaaccaactttcgctgtgcgctgcatagc
acacgacgcttcgtgatgctgaaagacaactctggggaccctgtcgacccacacaaaatt
tacatgctcagttctaagccggggtgcagagcctccgaaagcccagctgtccaccagggg
gaggaagaggccttcagaggtgccccaccagcacagggcggagccccagggccactcctg
acgggacctgctgagccccaagacctcctgcttcaggttctgcagcagagtctggtggag
gatcacctgctggatgctgtattgggaggaaactcagctcccacccaggctccagctcct
ctgtggttcttaggcccagagcacccttctgaggagcctgtggcagcatggactatggag
gctacccccagccccaggcctcagcacccagtactgatgacagagcctggcccaggagcc
ctggatgtgactatcttgtacaaaggccgcatagtactacaggcagtggtggggcacccc
agctgtgtgttcctatacaaccccacaggcccagctgccctggccacagaggcccagcca
gtggtcttccccagccctgctgagctccctgaccagaagcagctgcgctacacagaggaa
ctgttgcggcacgtggcccctggcctgcagctggagctgcgggggctggaactgtgggcc
ttgcgcatgggcaaatgcaaggtgtactgggaggtgggcagcccacagggctttgccagc
ccctccaccccagcccagctgctggagcgcaactgccaaacacccatcttcgactttagc
aacttcttcagagaactgggtgagttccgggcaaggcggcgccaagactctcctcactac
accatctacctgggcttcgggcaggacctgtctgccagaaggcccaaggagaagagcctg
gtcctggtgaagctggagccacggctgtgccgggtgcatgtggagtgtgtgcagcgggag
ggtgtgtcctccttggacagcagcagtcttggcctgtgcctgtccagcaccaacagcctc
tatgatgacatcgagcacttcctcatgacttggaacagtgggcagaagccagcctccctc
tcccctcaataa
DBGET
integrated database retrieval system
