Perognathus longimembris pacificus (Pacific pocket mouse): 125361226
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Entry
125361226 CDS
T08928
Symbol
Paaf1
Name
(RefSeq) proteasomal ATPase-associated factor 1
KO
K11887
proteasomal ATPase-associated factor 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
plop03051
]
125361226 (Paaf1)
Proteasome [BR:
plop03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
Other PIPs
125361226 (Paaf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_like
Motif
Other DBs
NCBI-GeneID:
125361226
NCBI-ProteinID:
XP_048215465
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Position
13:complement(11138577..11166569)
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AA seq
392 aa
AA seq
DB search
MAAPLRIQSDWAQVLRKDEGEAWVSCHPQGKPSLYGSLTCQGISLDGIPEVTASEGFIVN
EINKKSIHISCPKESASSKFLAPYTTFSRIHTKSITCLDISSGGGLGVSSSSDGSMKIWQ
ASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGIL
DTAIVDRGRNVVSGSRDGTARLWDCGRSACLGIIADCGSSINGVAVGAADNSINLGSPEQ
MPSDREVGTESKMLLVAREDKKLQCLGLQSRQPVFLFVGSDAFNCCTFLSGFLLLAGTQD
GNIYQLDVRSPRAPVQIIHRSGAPVLSLLSFRDGFIATQGDGSCFIIQQDLDYVIELTGA
DCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccttgaggattcagagcgactgggcccaggtcctcaggaaagatgaaggg
gaggcctgggtgagttgtcacccccaagggaagccatctttgtatggcagcttaacttgt
caaggaattagcctagatggcatcccagaggttacagcttcagaaggctttattgtgaat
gaaataaacaagaaaagcattcatatttcatgtccaaaggagagtgcatcttctaagttt
ttggcaccgtatactactttttccagaattcacacaaagagtataacatgcctggacatt
tccagcggaggaggccttggtgtgtcttctagttctgatgggagcatgaagatctggcag
gcttcaaatggagaactcagaagagtattggaaggacatgtgtttgatgtgaattgttgc
aggtttttcccatcaggcctcgtggttctgagtgggggaatggatgctcagctgaagatc
tggtcagctgaagatgctagctgtgtggtgaccttcaaaggtcacaaaggaggcatcttg
gatacagccattgttgatcgagggaggaacgtggtgtctgggtctcgagacggaacagca
cgactttgggattgtgggcgctcagcctgcttgggaatcattgcagactgtggttcttcc
attaatggagtggccgtgggggctgctgacaactccataaaccttggctcccccgagcag
atgcccagtgatcgggaagttggaacagagtcaaaaatgctgctggtggcccgggaagat
aagaagcttcagtgcttgggactgcagagcaggcagccggtgttcctctttgttggctcg
gatgccttcaactgctgtacttttctttctggtttcctgctgttggccgggacacaagat
ggaaacatttaccagctggatgtgagaagtccaagggctccagtgcagatcattcacaga
tcaggagccccagttctgtccttgctgagtttcagagatggattcattgctacccaaggt
gatgggagctgcttcattattcagcaagacttggattacgtcattgagctcactggggct
gactgtgaccctgtgtacaaggttgccacctgggagaagcagatctacacatgctgtcga
gatggtcttgtgcgacgctatcagctttctgacctctga
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integrated database retrieval system
