Perognathus longimembris pacificus (Pacific pocket mouse): 125361236
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Entry
125361236 CDS
T08928
Symbol
Cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125361236 (Cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125361236 (Cnot2)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125361236 (Cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125361236 (Cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
125361236
NCBI-ProteinID:
XP_048215491
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All DBs
Position
1:complement(35819895..35907610)
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AA seq
550 aa
AA seq
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MRTVRKGHDSMVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMF
PHRSEKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHV
TPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSS
PSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDF
PALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKD
PTSSNDDSKSNLNTSGKTTSNTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGM
VTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRP
QDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWR
YHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPST
FNYNPAQQAF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtgaggaaaggacacgactctatggtgaggactgatggacatacattatct
gagaaaagaaactaccaggtgacaaacagcatgtttggtgcttcaagaaagaagtttgta
gagggggtcgacagtgactaccatgatgaaaacatgtactacagccaatcttctatgttc
ccacatcggtcagaaaaagatatgctggcatcaccatctacatcaggtcagctgtctcaa
tttggggcaagtttatacgggcaacaaagtgcactaggccttccaatgagggggatgagc
aacaatacccctcagttaaatcgcagcttatcacaaggcactcagttaccgagccacgtc
acgccaacaacaggggtaccaacaatgtcacttcacacgcctccatctccaagcaggggt
attttgcctatgaatcctaggaatatgatgaaccactcccaggttggtcagggcattgga
attcctagcaggacaaatagcatgagcagttcagggttaggtagccccaacagaagctcg
ccaagcataatatgtatgccaaagcagcagccttctcgacagccttttactgtgaacagt
atgtctggatttggaatgaacaggaatcaggcatttggaatgaataactccttatcaagt
aacatttttaatggaacagatggaagtgaaaatgtgacaggattggacctttcagatttt
ccagcattagcagaccgaaacagaagggaaggaagtggtaacccaactccattaataaat
cccttggctggaagagctccttatgttggaatggtaacaaaaccagcaaatgagcaatcc
caggacttctcaatacacaatgaagattttccagcattacctggttccagctataaagat
ccaacatcaagtaatgatgacagtaaatctaatttgaacacatctggcaagacaacttca
aatacagatggacccaaatttcccggagataaaagttcaacaacacaaaataataatcaa
cagaaaaaagggatccaggtgttacctgatggtcgggttactaacattcctcaagggatg
gtgacggaccaatttggaatgattggcctgttaacatttatcagggcagcggagacagat
ccaggaatggtacatcttgctttaggaagtgacttaacaacattaggcctcaatctgaat
tctcctgaaaatctctaccccaaatttgcatcaccctgggcatcttcaccatgtcgaccg
caagacatagacttccatgttccatctgagtacttaacgaacattcacattagggataag
ctggctgcaataaaacttggtcgatatggagaagaccttctcttctatctctattacatg
aatggaggagatgtattacaacttttagctgcagtagagctttttaaccgtgattggaga
taccacaaagaagaacgagtatggattaccagagcaccaggcatggagccaacaatgaaa
accaatacatatgagaggggaacatattacttctttgactgtcttaactggaggaaagta
gctaaggagttccatctggaatatgacaaattagaagaacggcctcacctgccatccacc
ttcaactacaaccctgctcagcaagccttctaa
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