Perognathus longimembris pacificus (Pacific pocket mouse): 125361265
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Entry
125361265 CDS
T08928
Symbol
Znf408
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 408
KO
K24372
zinc finger protein 408
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09112 Not included in regular maps
09113 Global maps only
125361265 (Znf408)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125361265 (Znf408)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125361265 (Znf408)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-C2H2_6
PRDM2_PR
zf-met
zf-Di19
Teflon_C
GAGA
DUF7410
zf-C2H2_15
zf-C2H2_16
zf-C2H2_11
Zn_ribbon_9
Ribosomal_aS21
Motif
Other DBs
NCBI-GeneID:
125361265
NCBI-ProteinID:
XP_048215563
LinkDB
All DBs
Position
13:48339070..48346553
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AA seq
810 aa
AA seq
DB search
MRSDILESFLRGNLEVKSCFREELRRGGSLPEKGGFRTWDGEAEQLCLQTLSLSPEPPLG
PDSGWSSSREGCAPDPKNLLPGPSPAVLALKSLPGGLAVDPSRVREQRLGVWCVGEPLQP
GLRWGPLEEESMSEKDQRVKPSQEEALSHGPWGAMCTRKXCSGSTSLVQQARLESEGNVA
LIWINKRLHLQVYQVLLPGFELLLWPQHLSESLSPTQLKTEDGAMVVEEESSVRKEVSSP
EEDTAEPCTDLGYLSPHSNQAEHMMSPGPVSPSQDQPSKENQPLGPLLQGGCVDEEHPLP
AETSPSARGTQPHAFLTKKLHVPSDQRLPGTKTSEPGAQLLGFPVHLGRLPGPARSSPKQ
GRWYPCGECGKAFLQLCHLKKHEFIHTGHKPFLCTECSRSYSSEESFKAHTLGHRGVQPF
PCPQCDKAYGTRRDLREHXVVHSGARPFVCDQCGKAFARRPSLRLHRKSHQAPAAPALCP
CPVCGRSLANQGSLQNHMRLHTGEKPFLCPHCGRAFRQRGNLRRHMQLHMGECPYSCPHC
AAFPQLPELRRHLISHTGEAHLFPVCGKALRDPHTLCAHERLHSRERPFLCPQCGRAYTL
ATKLRRHLQSHLADKPYRCLTCGMGDALPQGLKRHQLSPQPQGPPAVPSVPPAASEPTTV
LLQTEPALRDTGSQQEVPPGRDVVEVIIALSQEKYIVGPEEPGPGPSMVLIHKDAGAFGG
WADMEDGEASTRPIKTVLALHVWVLFLFASPGRYRSVLREADQDSLPCLCTTIVSRTASD
LAEMFVLRWEGQAALPGQARPLSNKPLDLE
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgagatctgacattttggagtcgttcctcagaggaaatttggaagtcaaaagctgtttc
cgggaggagctgagaagaggaggctcacttccggagaagggaggctttcggacctgggat
ggggaggcggagcagctgtgcttgcagacactgtcgctctcccccgagccgcctctgggc
ccggactcaggatggagttcttccagagaaggttgtgcaccggaccccaaaaacctcctg
cctggaccgagcccagccgtcctggctctgaagagcctccccgggggcttggctgtcgac
ccctcgcgtgtcagggaacagcgcttgggtgtctggtgtgttggggagcccttgcagccc
gggctacgctgggggccgctggaagaggagtccatgtctgagaaggaccaaagagtgaag
ccatcgcaggaggaagctctatcacacggcccatggggagctatgtgcaccaggaaatag
tgttcaggctcgaccagtttggtgcagcaggccagactggagagtgagggaaatgtggcc
ctgatttggatcaacaagaggctccacctgcaggtataccaggtcctgctgccaggtttt
gagctgctgctgtggccccagcatctgtcagagagcctgagcccaacacagctcaagaca
gaggatggggcaatggtggtggaagaagaatcttctgtacgaaaagaagtatcctcccct
gaagaagatacagcagaaccttgcacagacttgggttacctgtcacctcatagtaaccag
gcagaacacatgatgagccctggacctgtgtctccatcccaggaccaaccttccaaagag
aaccaaccccttggcccattgcttcagggtggctgcgtggatgaggagcacccactgccc
gcagagacgtccccttctgccaggggcacccagccacatgccttcttaaccaaaaagtta
catgtccccagtgaccagcgcctaccaggaacaaagacctcagagcctggggcccagctc
ttgggctttcctgtacacttaggaagactgcctggcccagcaagaagctcccccaaacag
gggcgctggtacccatgtggggaatgtggcaaggcattcctgcagctgtgccaccttaag
aagcatgagttcatacacacgggccacaagcccttcctgtgcacagagtgcagcaggagc
tatagctcagaggagagtttcaaagcccacacgctgggccaccgaggcgtgcagcccttc
ccctgcccacagtgtgacaaggcctacggcacccggcgagacctcagagagcactaggtg
gtccactcaggtgcccggccctttgtgtgtgaccagtgtggcaaggcctttgcccgccgg
ccctccctgcggctccatcgcaagagtcaccaggcgcctgctgcccctgccctgtgccca
tgcccagtgtgtgggcgctccctggccaaccaaggctccctgcagaaccacatgcgtctc
cacacgggagagaaacccttcctgtgcccacactgcggccgggccttccgccagcggggc
aacctgcgcaggcacatgcagctgcacatgggagagtgcccttacagctgcccacactgt
gcggccttcccccagctgcccgagctgcggcgccatctcatctcccacacaggggaggcc
cacttgttccctgtgtgtgggaaggccctccgagacccacataccctctgtgctcacgag
cgcctgcactccagggagaggcccttcctgtgcccccagtgtggccgggcatacacgctg
gccaccaagctgcggcgtcacctgcaatcccacttggctgataagccctaccgctgcctt
acctgtggcatgggcgatgccctcccccaaggcctcaagcggcaccagcttagtccccag
ccccagggtcctcctgctgtcccctctgtgcctcctgccgcctctgaacccaccacggtg
ctcctgcagactgagccggctctgcgggacacaggcagccaacaggaagtgcccccaggc
agggatgtggtcgaggtgatcattgcactgagccaggagaagtacattgtagggccagag
gagccaggtcccggccccagcatggtgctgatccataaggatgcgggcgcgtttggtggc
tgggctgacatggaggatggggaggcaagcacccgacccataaagactgttctcgctcta
catgtttgggtcctctttctctttgcgtcccctggccggtacaggagtgtcctgagagaa
gcagatcaggacagccttccctgcttatgcaccactattgtgtccaggactgcgagtgac
ctagcagagatgtttgtattgcggtgggaggggcaggctgctctgccaggccaggccagg
cccctgagcaacaagcccttagatttggaatga
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