Perognathus longimembris pacificus (Pacific pocket mouse): 125361312
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Entry
125361312 CDS
T08928
Symbol
Cpt1a
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00071
Fatty acid degradation
plop01212
Fatty acid metabolism
plop03320
PPAR signaling pathway
plop04148
Efferocytosis
plop04152
AMPK signaling pathway
plop04714
Thermogenesis
plop04920
Adipocytokine signaling pathway
plop04922
Glucagon signaling pathway
plop04931
Insulin resistance
plop04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
125361312 (Cpt1a)
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
125361312 (Cpt1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125361312 (Cpt1a)
09150 Organismal Systems
09152 Endocrine system
04922 Glucagon signaling pathway
125361312 (Cpt1a)
04920 Adipocytokine signaling pathway
125361312 (Cpt1a)
03320 PPAR signaling pathway
125361312 (Cpt1a)
09159 Environmental adaptation
04714 Thermogenesis
125361312 (Cpt1a)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
125361312 (Cpt1a)
04931 Insulin resistance
125361312 (Cpt1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
plop03029
]
125361312 (Cpt1a)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
125361312 (Cpt1a)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
125361312 (Cpt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
125361312
NCBI-ProteinID:
XP_048215651
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Position
13:complement(60389932..60425849)
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AA seq
775 aa
AA seq
DB search
MAEAHQAVAFQFTVTPDGIDLRLSHEALKQICLSGLHSWKKKFIRFKNGVLTGVFPASPS
SWLIVVVGVISSTYTKVDPSLGLITRINRTLDTVATGRLSCQAKSVVSSVLFGTGLWVAL
IVTMRYSLKVLLSYHGWMFLEHGKMSRSTRVWMAMVKVFSGRKPMLYSFQTSLPRQPVPA
VSDTVNRYLESVKPLMKDGEFQRMTALAQDFAANLGPKLQWYLKLKSWWATNYVSDWWEE
YIYLRGRGPIMVNSNYYAMDQILAESTHIQAAKAGNAIHAMLLYRRKLDREEIKPIRVLG
STVPLCSAQWERLFNTCRIPGEETDTIQHLKDSKHLAVYHRGRYFRVPLYHSGRLLRPRE
LEQQMQRILDDPSEPQPGEARLAALTAGDRVPWAKCRQAYFGRGRNKQSLDAVEKAAFFL
TLDETEQGYRKEDPVASLDGYAKSLLHGQCYDRWFDKSITLIVFKNGKMGINAEHSWADA
PIVAHMWEFVMATDSFALGYAEDGHCRGETNASLPPPTRLQWDIPEECQAVIETSLNSAS
LLADDVDLYSFSFSTFGKGLIKKCRTSPDAFIQMALQLAQYKDMGKFCLTYEASMTRLFR
EGRTETVRSCTSESCNFVLAMVDPTQTVEQRLKLFKLASEKHQQLYRLAMTGAGIDRHLF
CLYVVSKYLAVESPFLKEVLSEPWRLSTSQTPHQQVELFDLENNPHHISGGGGFGPVADD
GYGVSYILMGESYIHFHVSSKLSSPETDSHRFGKHLREAMTDILSLFTLASNSKK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggctcaccaggctgtggccttccagttcaccgtcacccccgacggcatcgac
ctccggctgagccacgaggccctgaagcagatctgcctctcgggactccactcctggaag
aagaagttcatccgcttcaagaatggcgtcctgaccggcgtgttcccggccagcccctcc
agctggctcatcgtggtggtcggcgtgatttcgtccacttacaccaaggtggacccctcc
ttggggctgatcacgaggatcaaccggaccctggacacggtcgccaccggccgcttgtcc
tgccaggccaagagcgtggtgagcagcgtgctgttcggcaccggcctgtgggtggcgctc
atcgtcaccatgcgctactcgctcaaggtgctcctctcctaccacggctggatgttcttg
gagcacggcaagatgagccgctccaccagggtctggatggccatggtcaaggtgttctcg
ggccggaagcccatgctgtacagcttccagacgtccctgccccgccagcctgtgcccgcc
gtcagcgacacggtcaacaggtacctggagtccgtgaagccgctgatgaaggacggggag
ttccagcggatgacggcgctcgcccaggacttcgcggccaacctgggccccaaactgcag
tggtacctgaagttgaaatcctggtgggccaccaattacgtgagcgactggtgggaggag
tacatctacctccggggccgagggccgatcatggtgaacagcaactactatgccatggac
cagatactggccgagtccacgcacatccaggccgccaaggccggcaacgccatccacgcc
atgctgctctaccgacgcaagctggaccgggaggagatcaaaccaattcgcgtgttgggg
tccacggtcccgctctgctccgcgcagtgggagcggctgttcaacacgtgccgcatccca
ggggaggagacggacaccatccagcacctgaaggacagcaagcacctcgccgtgtaccac
cggggccgctacttccgggtgcccctgtaccacagcgggcggctgctgcggccccgcgag
ctggagcagcagatgcagcgcatcctggacgacccctcggagccgcagcccggggaggcc
aggctggccgccctcaccgccggcgacagggtgccgtgggccaagtgtcgccaggcctac
ttcgggcggggcagaaacaagcagtccctggacgcggtggagaaggcggccttcttcttg
acgctggacgagacggagcaggggtacaggaaggaggaccccgtggcgtccctggacggc
tacgccaagtcgctcctgcacggccagtgttacgacaggtggttcgacaagtccatcacg
ctcatcgtcttcaaaaacggcaagatgggcatcaacgccgagcactcgtgggcggacgcg
cccatcgtggcccacatgtgggagtttgtcatggccaccgacagctttgccctaggctac
gcggaggatgggcactgcagaggagagaccaacgccagcctccccccgcccacgcggctg
cagtgggacatcccggaggagtgccaggcggtcatcgagacatccctgaacagcgccagc
ctcctggccgatgacgtggacctctactccttctcgttcagcacgtttggcaaaggcctg
atcaagaagtgccgcacgagcccggacgcgttcatccagatggccctgcagctggcgcaa
tacaaggacatgggcaagttctgcctcacctacgaggcctccatgacccggctgttccgc
gaggggaggacggagaccgtgcgctcctgcacctccgagtcctgcaacttcgtgctggcc
atggtggaccccacgcagacggtggagcagaggctcaagctgttcaagctggcgtccgag
aagcaccagcagctgtaccgcctggccatgacgggcgcgggcatcgaccgccacctcttc
tgcctttacgtcgtgtccaaatacctggccgtggaatcccccttccttaaggaagtgctg
tccgagccttggaggctgtccaccagccagacgcctcaccagcaggtggagctgttcgac
ctggagaacaacccgcaccacatttccggcggcgggggctttgggccggtggctgacgat
ggctacggcgtgtcctacatcctcatgggcgagagctacatccacttccacgtctcctcc
aagctgtcgagccccgagacggattctcaccgctttgggaagcacctgagggaagccatg
acggacatcctcagcttgtttacgctcgcatctaattccaaaaagtaa
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