Perognathus longimembris pacificus (Pacific pocket mouse): 125361363
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Entry
125361363 CDS
T08928
Symbol
Rrp8
Name
(RefSeq) ribosomal RNA-processing protein 8
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125361363 (Rrp8)
Enzymes [BR:
plop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
125361363 (Rrp8)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125361363 (Rrp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_12
Ubie_methyltran
Methyltransf_23
Anamorsin_N
RNHCP
EF-1_beta_acid
Motif
Other DBs
NCBI-GeneID:
125361363
NCBI-ProteinID:
XP_048215748
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Position
13:complement(14679892..14687159)
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AA seq
454 aa
AA seq
DB search
MFEEPEWAEAGPVVAGLGLVTSRAPPATAPKVKGRKRRKLLATLRALEAASLSQQPLSLP
GSDSEEEDGERKKKHCPEPLLSSASAGTGGKRKKKCQTQTPPPSDSEDKGVERKKGHKQT
LLDIDCAEGKTKRQCQKQAPSNLIQPLNNVDRSGKVLEKSATNDPPKPSPGLTSPDTPHT
LSRKQWRNRQKNKRRHKNKFRPPQTSAQAPAEASTEETEVLPVPRSDSQEARGEALRARM
TQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLHPVDRIAKD
LRQRPASLVVADFGCGDCRLASSVRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVF
CLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRAFLRAVTKLGFKVLYKDLTNS
HFFLFDFEKTGPPQVGPKAQLSGLKLQPCLYKRR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggagcccgagtgggccgaagcggggcccgtggtcgcgggcctcgggctggtg
acctccagggccccgccagcaacagcccccaaagtcaagggccgcaagcgccgcaagctc
ttggccacattacgggccctggaagcagcatctctttcccagcaacccctgagcctgcct
ggcagtgactctgaagaggaagatggagaaaggaagaagaaacactgcccagagcctttg
ctttccagtgcttctgctggcacaggggggaaaaggaagaagaaatgtcaaacacagact
ccacctcccagtgattctgaggacaagggagtagaaaggaagaagggccacaaacaaact
cttcttgacattgactgtgctgaaggaaaaacaaagaggcaatgccagaaacaagcccct
tcaaacctaatccagcctctgaataatgttgaccgatcaggtaaagtcttggagaaaagt
gctacaaatgacccacctaagccaagccctgggttgacttcccccgacacgccccacacc
ttgagccgcaagcagtggcggaaccggcagaaaaacaagcggagacacaaaaacaaattt
cggccacctcagacatcagcccaggctcctgctgaggcctccacagaggagaccgaggtg
cttcctgttcccagatcagacagccaggaagcccggggagaggccctgcgagctcggatg
acacagcggctggatggagcccgattccgctacctcaatgaacagctgtactcggggccc
agcagcgctgcccagcgcctcttccaggaagaccctgaggcttttctcctctaccatcga
ggtttccagagccaagtgaagaagtggcccctacatccagtagatcgaattgccaaggat
cttcgccagcggcctgcatctttggtggtggctgactttggctgtggggattgtcgccta
gcatccagtgtccggaaccctgtacactgctttgacttggcttctctggaccccagggtc
actgtgtgtgacatggcccaggtgcctctggaggatgagtctgtggacgtggctgtgttt
tgcctttcactgatgggaaccaacatcagggacttcctagaggaggcaaatcgtgtgctg
aagccagggggtctcctgaaggtcgccgaggtcagcagccgctttgaagatgttcgggcc
tttctgagggctgtgaccaagctggggttcaaggtcctctataaggacctgaccaacagc
cacttctttttgtttgattttgaaaagactgggccccctcaggtaggacccaaagctcag
ctctcaggcctgaaacttcagccgtgtctgtacaagcgcaggtga
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