Perognathus longimembris pacificus (Pacific pocket mouse): 125361461
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Entry
125361461 CDS
T08928
Symbol
Tub
Name
(RefSeq) tubby protein homolog
KO
K19600
tubby and related proteins
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plop03037
]
125361461 (Tub)
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125361461 (Tub)
Cilium and associated proteins [BR:
plop03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125361461 (Tub)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Other domain-containing proteins
Tubby family proteins
125361461 (Tub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
Tub_N
DUF3527
Motif
Other DBs
NCBI-GeneID:
125361461
NCBI-ProteinID:
XP_048215905
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All DBs
Position
13:16304146..16323772
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AA seq
505 aa
AA seq
DB search
MTSKPLSDWIPYSVLDDEGSNLRQQKLDRQRALLEQKQKKKRQEPLMVQANADGRPRSRR
ARQSEEQAPLVESYLSSSGSTSYQVQEADSLASVQLGATRPPAPASAKRTKAAAASGGQG
GASRKEKKGKHKGTSGPATLAEDKSEAQGPVQILTVGQSDHAQDEGETAAGGGPRPSGQD
LRAKMQRKGISSSMSFDEEEDEDENSSSSSQLNSNTRPSSATSRKSVREAASAPSPTAPE
PLADVEVQDLEEFGLRPAPQGITIKCRITRDKKGMDRGMYPTYFLHLDREDGKKVFLLAG
RKRKKSKTSNYLISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLESG
TLRQELAAVCYETNVLGFKGPRKMSVIVPGMNMVHERVSIRPRNEHETLLARWQNKNTET
IIELQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHGNDPDYIVMQFGRVAEDVFTMD
YNYPLCALQAFAIALSSFDSKLACE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgacttccaagccgctttccgactggattccctacagtgtcttagatgatgagggcagc
aacctgaggcagcagaagctcgaccggcagcgggcgctgctggagcagaagcagaagaag
aagcgccaggagcccctgatggtgcaggccaacgccgatgggcggccccggagtcggcgg
gcccggcagtccgaggagcaagcccccttggtggagtcctacctcagcagcagcggcagc
accagctatcaagttcaagaggccgactcacttgccagtgtgcagctgggagccacccgc
ccacccgcaccagcctcagccaagagaaccaaggcagccgccgcctcaggaggccagggt
ggggcctctaggaaagagaagaagggaaagcataaaggcaccagcgggccagcaacactg
gcagaagacaagtctgaggcccaaggtccagtgcagatcctgactgtgggccagtcagac
cacgcccaggacgagggggagaccgcagccggcgggggcccacggcccagcgggcaggac
ctccgcgccaagatgcagaggaagggcatctccagcagcatgagctttgatgaagaggag
gatgaggatgagaacagctcgagctcttcccagctgaacagcaacacccgccctagctct
gccactagcaggaagtccgtcagggaggcagcctcagcccccagcccaacagccccggag
ccgctggcagatgtggaggtccaggatcttgaggagtttggactgaggccggcgccccag
ggaatcaccatcaaatgccgcatcactcgagacaaaaaggggatggaccggggcatgtac
cccacctacttcctgcacctggatcgagaggatgggaagaaggtgttcctcctggcaggc
aggaagagaaagaagagcaaaacttccaattacctcatctctgtggacccaacagacttg
tctcgaggaggggacagctacatcgggaaactgaggtccaacctgatgggcaccaagttc
accgtttatgacaatggagtcaaccctcagaaggcatcatcctctactttggaaagtgga
accctgcgccaggagctggcagctgtgtgctatgagacaaatgtcttaggcttcaagggg
cctcggaagatgagtgtaattgtcccaggcatgaatatggttcacgaaagagtctctatc
cgtccccgcaacgagcacgagacgctgctagcacgctggcagaataagaacacggagacc
atcattgagctgcaaaacaagacgcccgtctggaatgatgacacacagtcctatgtgctc
aacttccacgggcgtgtcacccaggcctctgtgaagaacttccagatcatccatggcaac
gacccggactacatcgtcatgcagtttggccgggtggcagaggatgtgttcaccatggat
tacaactacccgctgtgtgcactgcaggcctttgccattgctctgtccagcttcgacagc
aagctggcttgcgagtag
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