Perognathus longimembris pacificus (Pacific pocket mouse): 125361482
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Entry
125361482 CDS
T08928
Symbol
Ctnnd1
Name
(RefSeq) catenin delta-1 isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04015
Rap1 signaling pathway
plop04520
Adherens junction
plop04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
125361482 (Ctnnd1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125361482 (Ctnnd1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
125361482 (Ctnnd1)
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
Atx10homo_assoc
UBA_HYPK
Motif
Other DBs
NCBI-GeneID:
125361482
NCBI-ProteinID:
XP_048215928
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All DBs
Position
13:52590554..52645286
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AA seq
964 aa
AA seq
DB search
MDDSEVESTASILASVKEQEAQFEKLTRALEEERRHVSAQLERVRVPPQDANPLMANGTL
TRRHQNGRFVGDADLERQKFSDLKLNGPQDHSHLLYSTIPRMQEPGQIVETYTEEDPEGA
MSVVSVETSDDGTTRRTETTVKKVVKTVTTRTVQPVPMGPDGLPVDASAVSNNYIQTLGR
DFRKNGNGGPGPYVGQAGTATLPRNFHYPPDGYSRHYEDGYPGGSDNYGSLSRVTRIEER
YRPSMEGYRAPSRQDVYGPQPQVRVGGSSVDLHRFHPEPYGLEDDQRSMAYDDLDYGMMS
DYGTARRTGTPSDPRRRLRSYEDMIGEEVPSDQYYWAPLAQHERGSLASLDSLRKGGPPP
PNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHP
KKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLS
SHDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSE
RSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERY
QEAPPNVANNTGPHAASCFGAKKGKDEWFSRGKKPTEDPANDTVDFPKRTSPARGYELLF
QPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLT
NEHERVVKAASGALRNLAVDARNKELIGKHAIPNLVKNLPGGQQNSSWNFSEDTVVSILN
TINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLE
KEGWKKSDFQVNLNNASRSQSSHSYDDSTLPLIDRNQKPDKKPDREEIQMSNMGSNTKLL
DNNYSTLNERGDHNRTLDRSGDLGDMEPLKGTPLMLDEGQESLEEELVLDDEGDRVSYPS
MQKI
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggacgactcagaggtggagtcgaccgccagcatcttggcctctgtgaaggaacaagag
gcccagtttgagaagctgacccgggcgctggaggaggaacggcgccacgtctcggcgcag
ctggaacgcgtccgggtcccaccacaagatgccaacccactcatggccaacggcaccctc
acccgccggcatcagaacggccggtttgtgggcgatgctgaccttgagagacagaaattt
tcagatttgaaactcaacggaccccaggatcacagtcaccttctgtatagcaccatccct
aggatgcaggagccagggcagattgtggagacctacacggaggaagacccggagggagcc
atgtctgttgtctctgtggagacttcagatgatgggactactcgtcgcacagagaccaca
gtcaagaaagtagtgaagactgtgacaactcggaccgtccagccagtccctatgggacca
gacggcctgcctgtggatgcctcggcagtttccaacaactacatccagactctgggtcgt
gacttccgcaagaatggcaatgggggaccaggtccctatgtggggcaagcaggcactgct
acccttccaagaaacttccactaccctcctgacggatacagccgccactacgaagatggt
tatcccggtggcagtgacaactatggcagtctgtcccgggtgacccgcattgaagagcgg
tataggcccagcatggagggctaccgggcccccagcagacaggatgtctatgggccccag
ccccaggttcgggtaggcgggagcagcgtggatctacatcgctttcatccagagccctat
gggctagaagatgaccagcgtagcatggcctatgatgacctggattatggcatgatgtct
gattatggcaccgcccgtcggacggggacaccctctgaccctcgtcgacgcctcaggagc
tatgaagatatgattggcgaagaggtgccatcggaccagtactattgggcccctctggcc
caacatgaacggggaagtttagcaagcttagatagcctgcgcaagggaggacctccacct
cccaactggagacagcctgagcttccagaggtgatcgccatgctagggttccgcctggat
gctgtcaagtccaacgcagctgcctacctgcagcacttatgctatcgcaatgataaggtg
aagactgacgtgcggaagctcaaggggatcccggtactggtgggattgttagaccacccc
aaaaaggaagtgcaccttggagcctgcggagccctcaagaatatctcttttggacgtgac
caagataacaagattgccataaaaaactgtgatggtgtacctgcccttgtgcgattgctt
agaaaggctcgtgatatggaccttacggaagttattactggaaccctgtggaatctctca
tcccacgactcgatcaaaatggagattgtggaccatgcactgcacgccttgactgatgaa
gtgatcattccgcattctggatgggaaagggaacctaatgaagattgtaagccacgccat
attgagtgggaatctgtgctcaccaacacagctggctgccttaggaatgtaagctcagag
aggagtgaagctcgcaggaaacttcgggaatgtgatggtttagtcgatgccctcattttc
attgtgcaggctgagattgggcagaaggattcagacagcaagctggtggagaactgtgtt
tgcctccttcggaatttatcctatcaagttcaccgggagatcccacaggcagagcgttac
caagaagcccctcccaatgttgctaacaatactgggccccatgctgccagctgctttggg
gccaagaagggtaaagatgagtggttctccagagggaagaagcccacagaggatcctgca
aacgatactgtggatttccccaaaagaactagtcctgctcgaggctatgagcttttattt
cagccagaggtggttcggatatacatctcactccttaaggagagcaagactcctgccatc
cttgaagcttctgctggagccatccagaatctgtgtgctgggcgctggacatatggtcga
tacatccgctctgctctgcgtcaagagaaggctctctctgccatagctgacctcctaacc
aatgaacatgagcgagtagtgaaggccgcctctggagcactgagaaacctggctgtggat
gctcgcaacaaagagttaatcggtaagcatgcgattcctaacttggtaaagaatctgcca
ggagggcagcagaactcctcctggaatttctctgaggacactgtggtctctattttgaat
accatcaatgaagttattgctgagaacttggaggctgcaaagaagcttcgagagacacag
ggtattgagaagctggtgttgatcaacaagtcagggaatcgctcagaaaaagaggttcga
gcagcagcacttgtattacagacaatctgggggtataaggaactgcggaagccactggaa
aaagaaggatggaagaaatcagattttcaggtgaatctaaataatgcttctagaagccag
agcagtcattcatatgacgatagtactctccctctcattgaccggaaccaaaaaccagat
aagaaacctgatcgggaagaaattcaaatgagcaatatgggatcaaacacaaaattatta
gataacaactattccacactgaatgaaagaggggaccacaacagaacactggatcgatct
ggggatctgggtgatatggagccattgaagggaacgcccttgatgctggacgaggggcag
gaatctctggaggaagagttggttttggatgatgagggggaccgggtttcttacccttcc
atgcagaagatttag
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