Perognathus longimembris pacificus (Pacific pocket mouse): 125361682
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Entry
125361682 CDS
T08928
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125361682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125361682
03041 Spliceosome [BR:
plop03041
]
125361682
03032 DNA replication proteins [BR:
plop03032
]
125361682
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
125361682
Spliceosome [BR:
plop03041
]
Complex A
U1 snRNP components
Sm proteins
125361682
U2 snRNP components
125361682
Complex B
U1 snRNP components
125361682
U4/U6.U5 tri-snRNP components
125361682
Complex C
U2 snRNP components
125361682
DNA replication proteins [BR:
plop03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
125361682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
125361682
NCBI-ProteinID:
XP_048216220
LinkDB
All DBs
Position
13:36554051..36554329
Genome browser
AA seq
92 aa
AA seq
DB search
MVYRGQGQKVQKVMVQLIKLIFRYLQNRSWIQVWLYEQVNMQIEGCIIGFDEYMNLVLDD
AEKIHSKTKQRRKLGWIMPKGDNITLLQSVSN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggtgtaccgtggccagggccaaaaggtgcagaaggtgatggtgcagctcatcaagctc
atcttcagatacctacaaaatagatcttggattcaggtgtggctctatgagcaagtgaat
atgcagatagagggctgcatcattggttttgatgaatacatgaaccttgtgttagatgat
gcagaaaaaattcattctaaaaccaagcaaagaagaaaactgggttggatcatgccaaaa
ggagataatattactctactacaaagtgtctccaactag
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