Perognathus longimembris pacificus (Pacific pocket mouse): 125361726
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Entry
125361726 CDS
T08928
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125361726
Ion channels [BR:
plop04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125361726
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
125361726
NCBI-ProteinID:
XP_048216260
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Position
13:12649098..12666367
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AA seq
898 aa
AA seq
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MDPLPPQPNWTEIVNKKLKFPPQLLGAIQEGRLGLVQQLLESGVEATGGGPGGPLRNVEE
AEDRSWREALNLAIRLGHEAITDVLLANIKFDFRQIHEALLVAVDTNQPAVVRRLLARLE
REKGRKVDTKSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQLLMDQGHTIARPHP
ISCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLAAFQLSRELRRLARK
EPEFKPEYIALESLSQDYGFELLGMCRNQSEVTAVLNDLGEDIETEPEAEGLAQAFEEGI
PNLARLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLFIAFLIFLTMPFL
CIGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGESLAMETQLSTFRGRSQSVWE
TSLHMIWVAGFLWFECKEVWIEGLRSYLLDWWNFLDVVILSLYLAAFALRILLAGLAFLH
CRDASDGPTCHYFTTAERSEWRTEDPQFLAEVLFAVTSMLSFTRLAYILPAHESLGTLQI
SIGRMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGNFNETFQFLFWTMFGMEEH
SVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKL
YLSYFREGLTLPVPFNILPSPKAFFYFLRRIFQIICCCCCCCKTKKPAYPPTPTFANPGA
GAGIGVGPGKGERGSYRLRVIKALVQRYIETARREFEETRRKDLGNRLTELTKTVSRLQS
EVAGVQRTLATGGTPRPPDGASILSRYITRVRNSFQNLGPSILESPELAVPGVMETQDSL
EAGLRAGLPAEAGTPASEEGVPSSPNHVLVHECVPSSPVRVLVHREQEGEGPGDVPPP
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggacccccttccgccgcaacccaactggacagagatcgtgaacaagaagctcaagttt
cccccccaactcctaggtgccatccaggaggggcgtctggggcttgtgcagcagctgctg
gagtcgggggtagaggccacaggtggggggccgggcgggccgctgcggaacgtggaggag
gctgaggaccgctcctggagagaagccctcaacctggccatccgcctgggccacgaggcc
atcaccgatgtgctgctggccaatatcaagtttgacttcagacagatccacgaagccctg
ctggtggccgtggacaccaaccagcccgcggtggtgcggcgcctgctggcccggctggaa
cgggagaagggccgcaaagtggacaccaagtctttctcgctagctttctttgactcctca
atcgatggctcccgctttgcgccgggtgtgacgccgctcaccttggcctgccagaaggac
ctgtatgagatcgcacagctgctcatggaccagggccacaccattgcccggccccacccc
atctcctgtgcctgcctcgagtgcagcaacgcccgccgctatgacttgctcaagttctcc
ctgtcccgcatcaacacctaccgcggcattgccagcagggcccacctgtcgctggccagt
gaggacgccatgctggctgccttccagctcagccgggagctcaggcgcctggcacgcaag
gagcctgagtttaagcctgagtacattgccctggagtcactgagccaggactacggcttt
gagctactgggcatgtgccggaaccagagtgaggtcactgcagtgctcaacgacctggga
gaggacatcgagacagagcctgaggccgagggcctggcccaggcctttgaggaaggcatc
cccaacctggcgaggctacggctggctgtgaactacaaccagaagcggtttgtagcacac
cctatctgccagcaagtcctgtcctccatctggtgtgggaacctggctggctggcgtgga
agcaccaccatctggaagctgttcatcgccttcctcatcttcctcaccatgcccttcctc
tgcattggctactggctggcacccaagtctcggctgggccgcctgctgaagatccccgtg
ctgaagttcttgctgcactcagcctcctacctgtggttcctcatcttcctgctgggagag
tccctggccatggagacgcagctgagcaccttccgaggccgcagccagagtgtctgggag
acttcactacacatgatttgggtcgcaggcttcctgtggtttgagtgtaaggaagtgtgg
atcgagggcctgcgcagctacctgctggactggtggaacttcctggatgtggtcatcctg
tctctgtacctggcggccttcgcactgcgcatcctcctggcggggcttgccttcctgcat
tgccgggatgcctctgatggccccacctgtcactatttcaccacggctgagcgaagcgag
tggcgcacagaggatccccagttcttggccgaggtgctctttgccgtcaccagcatgctc
agctttacccgcctggcctacatcctgccagcccacgagtccctgggcacgctgcagatt
tccattggcaggatgatcgatgacatgatccggttcatgttcatcctcatgatcatcctg
actgccttcctctgtggcctcaacaacatctacgtgccttaccaggagacagagcggctg
ggcaatttcaacgagacattccagtttctgttctggaccatgtttggcatggaggaacac
agcgtggtcgacatgcctcagtttctggtgcctgaatttgtgggccgagccctctacggc
atcttcaccatcgtcatggtcattgtgctgctcaacatgctcattgccatgatcaccaac
tccttccagaagatcgaggacgatgctgatgtggaatggaagtttgctcgctccaagctc
tacttgtcctacttccgagagggtctgacactgcctgtgcccttcaacatcctgccctct
cccaaggccttcttctactttctcaggagaatattccagatcatttgctgttgctgttgc
tgctgcaaaaccaagaagccagcctacccccccacccccacctttgccaaccctggggcc
ggggcagggatcggggtggggcctgggaagggtgagcgaggctcctaccgtctccgcgtc
atcaaggccctggtgcagcgctacatagaaactgcccgacgggagttcgaggagacccgc
cgcaaagacctgggcaacagactcacagagctgaccaagactgtatctcgcctccaaagc
gaggtggccggcgtgcagcggaccctggcgacgggagggacaccccggccccccgacggc
gccagcatcctcagccgctacatcacgcgtgtgcgcaacagcttccagaacctgggcccc
tccattctggagagcccagagctggctgtgccaggggttatggagacacaggactccctg
gaagctgggctccgggcgggacttccggcagaggctgggactccagcttccgaggagggc
gtgccttcttcccccaatcatgtgctggtgcacgagtgcgtgccttcttcccctgtgcgc
gtgctggtgcacagagagcaagagggagaggggcccggggacgtgcccccaccctga
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