Perognathus longimembris pacificus (Pacific pocket mouse): 125362237
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Entry
125362237 CDS
T08928
Symbol
Mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00450
Selenocompound metabolism
plop00970
Aminoacyl-tRNA biosynthesis
plop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
125362237 (Mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125362237 (Mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plop01007
]
125362237 (Mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125362237 (Mars1)
Enzymes [BR:
plop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
125362237 (Mars1)
Amino acid related enzymes [BR:
plop01007
]
Aminoacyl-tRNA synthetase
Class I (U)
125362237 (Mars1)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
125362237 (Mars1)
Prokaryotic type
Other AARSs
125362237 (Mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C
GST_C_2
GST_N_2
GST_C_3
DUF16
Motif
Other DBs
NCBI-GeneID:
125362237
NCBI-ProteinID:
XP_048216946
LinkDB
All DBs
Position
1:complement(44383000..44402151)
Genome browser
AA seq
907 aa
AA seq
DB search
MRLFVSEGAPGSLPVLAAAGRVRGRAELLISTVGPEECVVPFLTRPKVPVLQLDSGNYLF
STSAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKKGEDILGPLRKA
LIHIDQSLSRQNCPFLAGETESLADIVLWGALYPLLQDPTYLPEELGALCSWFQTLSTQE
PCQRAVETVLKQQGILAFRSYLQKQPQTHPPEGKVVSNEPEEEELTTLSEEEIAMAVTAW
EKGLGSLPLLRPQQNPVLPVAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRL
RQWNTLYLCGTDEYGTATETKAMEEGLTPQEICDKYHCIHADIYRWFNISFDIFGRTTTP
QQTKITQDIFQRLLTRGFVLQDTVEQLRCEQCARFLADRFVEGVCPFCGYEEARGDQCDK
CGKLINAIELKKPQCKVCRSCPVVRASQHLFLDLPKLEKRLEDWLGKTLPGSDWTPNARF
IIRSWLRDGLKPRCITRDLKWGTPVPLEGFENKVFYVWFDATIGYLSITANYTDQWERWW
KNPEQVDLYQFMAKDNVPFHGLVFPCSALGAEDNYTLVKHLIATEYLNYEDGKFSKSRGV
GVFGDMAQNTGIPADIWRFYLLYIRPEGQDSAFSWTDMLLKNNSELLNNLGNFVNRAGMF
VSKFFGGYVPKMVLTPDDQRLLAHITLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQ
VNEPWKRIKGNEADRQRAGTVTGLAVNIAALLSVMIQPYMPTVSTTIQAQLQLPLQVCSV
LPTKFLCTLPEGHQIGTVSPLFQKLENDQIESLRQRFGGGQLEESLEFKAKASPKSTVAE
TVTAGLQQIQMLMDEVTKQGNIVRELKAQKADKNQVAAEVAKLLDLKKQLALAEGKPLET
PKGKKKK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagactgtttgtgagcgagggcgcccctgggagcctgccggtgctggcagcggccggg
agggttcggggcagagcagagttgctcattagcaccgtaggcccggaagagtgtgtggtc
ccgttcctgactaggcctaaggtccctgtcttgcagctggatagtggcaactacctcttc
tccaccagtgcaatctgccgctatttctttctgttatctggctgggagcaagatgatctt
accaatcagtggctggaatgggaggcaacagaactgcagccagccttgtctgctgccctg
tactatttagtggtccaaggcaagaagggggaagatattcttggcccacttcggaaagcc
ctgattcacattgaccaaagcttgagccgtcaaaactgtccattcctggctggggagaca
gaatctctagctgatattgttttatggggagcactatacccattgctgcaagacccaacc
tacctccctgaggagctaggtgccttgtgcagctggttccagacactgagtacccaggag
ccatgtcagcgagctgtagagactgtgctgaaacagcagggtatcctggctttccgatcc
tacctccaaaagcagccccagacccacccacctgaggggaaggtggtcagcaatgagcct
gaggaagaagagctaactaccctatctgaggaggagattgctatggctgtgactgcgtgg
gagaagggcctgggaagcttgcctttgcttcggccccaacagaatccagtgttgcctgtg
gctggggaaaggaatgtgctcatcaccagtgccctcccttatgtcaacaatgtcccccac
cttggaaacatcattggttgtgtgctcagtgccgacgtctttgccagatactctcgcctc
cgccagtggaataccctctatctgtgtgggacagatgagtatggcacagcaacagagacc
aaggccatggaggagggtctaaccccgcaggaaatctgtgacaagtaccattgcatccat
gctgacatctaccgctggtttaatatctcgtttgatatttttggtcgcactaccactcca
cagcagaccaagatcacccaggacatcttccagcggttgctgacccgaggttttgtgcta
caagataccgtagagcaactgcggtgtgagcagtgtgcccgtttcctggctgaccgtttt
gtggaaggagtgtgtcccttctgtggctatgaagaggcccggggtgaccagtgtgataag
tgtggcaaacttatcaatgccattgagctcaagaaaccccagtgtaaagtctgccggtcg
tgccctgtggtgagggcctcccagcacctgttcttggacctgcctaagctggaaaagcga
ctggaggattggttggggaagacattgcctggcagtgactggacaccaaatgcccggttt
atcattcgttcttggcttcgggatggcctcaagccacgctgcataactcgagaccttaaa
tggggaacccctgtgcccttagaaggttttgagaacaaggtattttatgtctggtttgat
gctactattggttacctgtccatcacagccaactacacagatcagtgggaaagatggtgg
aagaacccagagcaagtggacctttaccagttcatggccaaagacaatgttcctttccat
ggcttagtctttccttgttcagccctaggagctgaggacaactacaccttggtcaagcac
ctcattgctacagaatacctgaactatgaagatgggaaattctctaagagccggggtgtg
ggagtgtttggtgacatggcacagaacacaggaattcctgctgacatctggcgtttttat
ctgctatacattcggcctgagggccaagatagtgccttctcctggacagacatgctgctc
aagaataattccgagctgcttaacaacctgggcaacttcgtcaacagagctgggatgttt
gtgtctaagttttttgggggctatgtgcctaagatggtgcttacccctgatgatcaacgc
ctacttgcccatatcaccctggagctccaacactatcaccagctactggaaaaggttcgg
atccgggatgccttacgcagtatcctcaccatatctagacatggtaaccaatacattcag
gtgaatgaaccctggaaacggattaaaggcaatgaggcagacaggcagcgtgcaggcaca
gtgacaggcttggcagtgaatatagctgccttgctctctgtcatgatccagccttatatg
cctacagttagcaccaccatccaagcccagctgcagctcccacttcaagtgtgtagtgtt
cttcccacaaagttcctgtgtaccttaccagaagggcaccagattggcacagtcagtccc
ctgtttcaaaaactggaaaatgaccagattgaaagtttgaggcagcgctttggagggggc
cagctagaagagtctttggagttcaaggcaaaagcatcccctaagtcaacagttgcagag
actgttacagctgggttgcagcagatacagatgctaatggatgaagtgacaaaacagggc
aacattgtccgagaactgaaagcgcaaaaggcagacaagaaccaggttgctgcagaggtg
gctaagctcttggacctaaagaaacagttggctctagctgaggggaaacccctcgaaact
cctaaaggcaagaaaaaaaagtga
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