Perognathus longimembris pacificus (Pacific pocket mouse): 125362280
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Entry
125362280 CDS
T08928
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop05014
Amyotrophic lateral sclerosis
plop05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125362280 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125362280 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125362280 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125362280 (Nup98)
03036 Chromosome and associated proteins [BR:
plop03036
]
125362280 (Nup98)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125362280 (Nup98)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125362280 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
125362280
NCBI-ProteinID:
XP_048217009
LinkDB
All DBs
Position
13:complement(12693858..12793805)
Genome browser
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGSTSGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGSLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTSNSLFGTSSTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTAGLFGSSPATSSAAGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGSLFGTATNTSTGTAFGTGTSLFGQTNTGFGAV
SSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGSSIF
GSKPAPGTLGTGIGTGGFGTALGPGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGF
GAPQAPVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQTTGTSKSHLFDGLDDDEPSLANGAFMPKKSIKK
LVLKNLNNSNLFSPVNRDSEDLASPSEYPENGERFGFLSKPVDENHQQDGDDDSLVSQFY
TNPIAKPIPQTPESVGNKHNSSNVDDTIVALNMRVALRNGLEGSSEETSFHDESLQDDRE
EIENNSYHLHPAGIVLTKIGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYLDDTEKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPSKTS
SKKLKTAPLPPAGQTTPFQMALNGKPASPPQIQSPEVEQLGRVVELDSDMIDITQEPVFD
SVLEENMPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDSMDQRFGHLPSKGD
TAQEICSPRLPISASHSSKSRPVVGGLLQSKFASGVFLSPSASVQECRIPRASSLMNMSS
PSPWSVPPPLTTVFTVPSPSPEVQLKTVGTRRQLGLVPLEKSVTYGKGKLLMDMALFMGR
SFRVGWGPNWTLANSGEQLNSSREPESHQVTDSMEYGFLPNPVAVKSLTESPFKVHLEKL
SLRQRRLDEDLQLYQTPLELKLKHSTVHVDELCPLIVPNVGVDVIHDYAAWVKEASRDVL
EAQIVKPWSLTWTLCEALWGHLKELDNQLDEPIEYIQILERRRAFSRWLSHTAAPQIEEE
VSLTRKDNPIEAVFSYLTGNKISEACSLAQHSGDHRLALLLSQLVGSQSVRELLTMQLAD
WHQLQADCFIQEERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTAS
ISRALSMYEEAFQNTSEGDRYACSPLPSYLEGSGCLMEEEQDSKRPLQDVCFHLLKLYSD
RHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLENEGL
WEWAIFVLLHIENSSMREKAVRELLTRHCQLVETPESWAKETFLTQKLCVPAEWIHEAKA
VRAHMESDKHLEALYLFKAGHWNRCHKLVIRHLASDAIINENYDFLKGFLEDLAPPERSS
LIQDWETSGLVYLDYIQVIEMLHHIQQVDCSGYELEKLHTKVTSLCNRIEQIQCHNAKDR
LAQSDMAKRIANLLRVVLSLQHGPDATSESTPDPQRVPLRLLAPHIGRLPMPEDYALEEL
RSLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaaccccctttgggggtagtacaagtggctttggcacaaca
tcaacatttggacaaaacactggctttggcaccactagtggaggggcatttggaacatct
gcatttggttctagcaacaatactggaagcttatttggaaattcacagaccaaaccagga
ggattatttggtaccagttcatttagccagccagctacctccacaagcactggttttggg
tttggtacatcaacaggaacatcaaatagcttgtttggaacttcaagtacagggactagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaactggctttggaaatttt
ggaacaagtacaagtagtgggggactctttggaacaacaaatactacctctaatcctttt
ggtagtacatcaggctccctctttgggccaagtagttttacagcagcacctactgggact
accattaaatttaatcctccaacaggtacagatactatggtcaaagctggagttagcacc
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcacta
gaggaacttcgtttagaggattatcaggctaaccgaaaaggtccgcagaaccaggtggga
gcagggactacagctggcttatttggatcttcaccagccacctccagtgcagcgggactc
ttcagctcctccaccactaattcaggctttgcatatggccagaacaaaactgcctttgga
actagtacaactggatttggaacaaatccaggtggtctctttggccagcagaatcagcag
actaccagcctcttcagcaaaccatttggccaggccacaactacccaaaacactggcttt
tcctttggtaataccagcacccttggacagccaagtactaataccatgggtttgtttgga
gtaacccaagcctcacagcctggaagtctttttgggacagctacaaacaccagcactggg
acggcttttggaacaggaacaagtctctttgggcagaccaatactgggtttggtgcagtt
agttcgaccctgtttggcaataacaagcttactacatttggaaccagtacaaccagtgct
ccttcatttggtacaaccagtggcgggctctttggtaacaaaccaactctgactttagga
accaatacaaacacttccaattttggttttggcacaaataccagtggaagtagtattttt
ggaagtaaaccagcacctgggactctgggaactgggattggtacaggaggatttggaaca
gctcttggtcctggacaagcatctttgtttgggaacaatcaacctaagattggagggcct
cttggtacaggagcctttggcgcccctggatttaatactacaacagccactttgggcttt
ggtgccccccaggctccagtagctttgacagatccaaatgcttctgctgcccagcaggct
gttctccagcagcacctcaatagtctaacatactcaccttttggagactctcctctcttc
cggaatcctatgtcagaccccaagaagaaagaagagagattaaaaccaacaaatccagca
gcccagaaggctcttaccacacctactcattataaactgacacctcgccctgctaccaga
gtcagaccaaaggctctgcaaacaacaggcacatccaaatcccatctcttcgatgggctg
gatgatgatgaaccatccctagcgaatggagcattcatgcccaagaagagcattaagaaa
ttagtcttgaagaaccttaacaacagcaatctcttttctcctgttaatcgtgattcagaa
gatctagcttcaccatctgaatatccagaaaatggagaaagatttggtttcctgagcaaa
cctgttgatgaaaaccatcagcaggatggagatgatgattctcttgtatcccagttttac
actaaccccattgccaaaccgattcctcaaaccccagagagtgttggaaataaacacaac
agcagcaatgtggatgataccattgttgcactgaacatgcgtgttgctttgcgaaatggc
ctagaaggaagtagtgaagaaacctccttccatgatgagtcactgcaagatgaccgagag
gaaatagaaaataattcttaccatctgcatccagcaggcattgttctcactaagattggt
tactatactattccatctatggatgaccttgctaaaattaccaatgaaaaaggagagtgc
atcgtctctgacttcactattggtcgtaaaggttatggctcaatctatttcgaaggagat
gtaaatttaacaaatctaaatttggatgacattgtgcatatccggaggaaagaagttatt
gtctacttagatgatactgaaaaaccacctgttggtgaagggctgaatagaaaggctgaa
gttacattggatggagtttggccaacagataaaacatcacgttgtttaataaagagtcca
gatagacttgctgacatcaactatgaggggagattggaagcagtttcaaggaaacaggga
gcccaattcaaggagtaccggcccgaaactggttcttgggtgtttaaggtctcccatttt
tctaaatatggccttcaggattctgatgaagaggaggaagaacatccatccaaaactagt
tcaaagaagttgaagactgcccctttgcctcctgcaggccagactactcctttccagatg
gctcttaatggcaaacctgcatctccacctcagatccagagcccagaagtggaacagtta
gggagggttgtggagctggacagtgacatgatagatatcacccaggagccagttttcgat
tctgtgttagaagagaacatgcctgaggatcaagaacctgtgtctgcgtcaacacatatt
gcatcttcactgggaattaatccacatgtcttacagattatgaaagcatcattgcttgct
gatgaagaagatgtagattccatggatcaacgctttggtcatcttccttccaaaggagat
actgctcaagaaatctgttctcccagactccccatttcagcatcccattcatcaaaatcc
cgtccagtagttggtgggttactacaatcaaaatttgcaagtggcgtttttctttcacca
agtgcctctgtgcaagaatgtcgcattcccagagcatcatctttgatgaatatgtcatcc
ccatctccttggtctgtccctccacccctgaccacagtgtttacagtgcccagtccaagc
cctgaggttcagctcaagacagtgggaacacgcaggcaactaggcctagtccctcttgaa
aagtctgtcacgtatggcaaggggaaactcctgatggacatggctcttttcatgggacgt
tcatttcgagttggttggggccctaactggactcttgctaatagtggagaacaactgaat
agctcacgtgaaccggaaagtcatcaggttactgattctatggaatatggattcctgccc
aatcccgtagctgttaaatctctaacagaatcccccttcaaagttcacttggaaaaactc
agtttgaggcaacggagactggatgaagacctgcaattatatcagacaccattagagctc
aaattaaaacatagcactgtccatgtggatgaactgtgtcctctcattgtccccaatgtg
ggagttgatgtcattcatgattatgctgcctgggttaaggaagcatccagagatgtattg
gaagcacaaattgtgaagccctggagcctcacgtggacattatgtgaagccctatggggc
cacctgaaggaacttgacaaccagctagatgagcccattgaatacattcagattctggaa
cgaagaagagctttttctcgctggctatcccatactgctgcacctcagattgaagaagaa
gtttctttaacccgaaaagacaatcctatagaggctgtcttcagctacctcacaggcaac
aagatcagtgaggcctgctctcttgcgcagcactcaggggatcatcgccttgcccttctt
ttatctcagttggtgggtagccaatcagtccgggagctactcaccatgcagctggcagat
tggcatcagctccaggctgactgtttcatccaggaggagaggttgcgcatctttgccctc
ttggctggaaaaccggtatggcagctctcagagcagaaacaaatcaatgtatgctcccag
ctggattggaaacgctcccttgctgtacatctttggtatttgcttccaccaacagcctcc
atttccagagcactcagcatgtatgaagaagcatttcaaaatacctctgagggtgacagg
tatgcctgttccccacttccttcatacctagagggttctggctgtttgatggaggaggag
caagactcgaagagaccacttcaagatgtttgttttcatcttctaaaactctacagtgac
agacattatgatctcaaccagctgttggagcctcgaagcataactgcagatcctttggac
tatcgcctgagctggcacttgtgggaagtgctgcgggctcttaactatacccatctctca
gagcagtgtgagggtgtgcttcaggccagttatgctggccagctggaaaatgagggtctc
tgggaatgggccatctttgttctcctgcacattgaaaactcaagcatgcgtgagaaggct
gttcgggagctgcttacccggcactgccagctggtggagactcctgaatcttgggctaag
gagacattccttacccagaagctttgtgtacctgctgagtggattcatgaggccaaagct
gtgcgagcccacatggaatctgataagcatttggaggctctttatttgtttaaagctggt
cactggaaccgctgccacaaacttgtcatccgacacttagcttctgatgccatcattaat
gagaactatgacttcctgaagggttttttggaagacctggcacctccagaacgcagtagc
ctaattcaggactgggaaacatctgggcttgtttacctggactatattcaagtcattgaa
atgctccatcatattcagcaggtggattgctcaggttatgaactagagaagttacacacc
aaagtaacgtcactgtgcaaccgcatagaacagatccaatgtcacaatgccaaggatcgt
ctggctcagtcagacatggccaaacgtatagccaatttgctgcgggtggtactaagcctg
cagcatggccctgatgcaacttcagaatcaacaccagaccctcagcgagtccctttgcgc
ctgctggctccccacattggccggctccccatgcctgaggactatgccttggaggaactg
cgcagcctcacacagtcctatctgcgagaactgactgttggaagccagtga
DBGET
integrated database retrieval system
