Perognathus longimembris pacificus (Pacific pocket mouse): 125362415
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Entry
125362415 CDS
T08928
Symbol
Shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00260
Glycine, serine and threonine metabolism
plop00630
Glyoxylate and dicarboxylate metabolism
plop00670
One carbon pool by folate
plop01100
Metabolic pathways
plop01200
Carbon metabolism
plop01230
Biosynthesis of amino acids
plop01240
Biosynthesis of cofactors
plop01523
Antifolate resistance
plop04981
Folate transport and metabolism
Module
plop_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
125362415 (Shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
125362415 (Shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
125362415 (Shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
125362415 (Shmt2)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
125362415 (Shmt2)
Enzymes [BR:
plop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
125362415 (Shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
125362415
NCBI-ProteinID:
XP_048217224
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Position
1:complement(44625446..44630980)
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AA seq
503 aa
AA seq
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MLPFSLLWAARPLQRCGQLVRTTRAQHIEAAQTQTRETTGGWTGQESLSDSDPEMWELLQ
REKDRQCRGLELIASENFCSRAVLEALGSCLNNKYSEGYPGKRYYGGAEVVDKIELLCQR
RALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLRPHDRIMGLDLPDGGHLTHGYMSDVK
RISITSIFFESMPYKLNPQTGLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREVC
DEVKAHLLADMAHISGLVAAKVIPSPFEYADIVTTTTHKTLRGARSGLIFYRKGVQSVDP
KTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQVCTPMFREYSLQVLKNARAM
ADALLTRGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELISITANKNTCPGDRSAITP
GGLRLGAPALTSRQFREDDFRRVVDFIDEGVKIGLEVKSKTAKLQDFKSFLLKDPETSQR
LAKLRQQVEQFARAFPMPGFDEH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttctctttgctttgggcggctcggcctctgcagagatgtggtcagctggta
aggacaactcgggctcagcacatcgaagcagctcagactcagacccgggaaacaactgga
ggctggacaggccaggagagtctgtcagacagtgatcctgaaatgtgggagctgctgcag
agggaaaaggacaggcagtgccgtggcctggagctcattgcttcagagaacttctgcagc
cgagctgtgctggaggccctggggtcctgtctgaacaacaagtactcggagggttatcct
ggcaagagatactatggaggagcagaggtagtggataaaattgagctgttgtgccagcgc
cgggccttggaagcctttgacttggatcctgcacaatggggagtgaatgtccagccctat
tcagggtcccctgccaatctagctgcctatacagcccttctgcggcctcatgaccggatt
atggggctggacctgcccgatggaggccatctcacccatggctatatgtctgatgtcaag
cggatctctatcacgtccatcttcttcgagtctatgccctataagctcaatccccaaact
ggcctcattgactatgaccagctggcattgactgctcggctcttccgacctcggcttatt
atagctggtaccagtgcctatgctcgcctcatcgattacgccagaatgagagaggtgtgc
gatgaggtcaaggcacacctcctggcagatatggcccacatcagtggcctcgtggccgcc
aaagtgatcccctcgcctttcgagtatgcagacattgtcaccaccaccactcacaagact
cttcgaggggccaggtcaggactcatcttctatcggaagggggtacagagtgtggacccc
aagactggccgggagatcccttacacatttgaggaccgaatcaactttgctgtgttccca
tcccttcaggggggaccccacaaccatgccattgctgcagtagctgtggccctgaagcag
gtttgcacacccatgttccgcgagtactccctgcaggtgttaaagaatgctcgagccatg
gccgatgccctgctaacgcgaggctactcactggtgtctggtggcactgataaccacctg
gtgctggtagaccttcggcccaagggcctagatggagcgcgtgctgagcgggtactggag
cttatatccatcactgccaacaagaacacatgtcctggagaccgaagtgccattacccct
gggggcctgcggcttggggccccagccttgacttctcggcagtttcgggaggatgacttt
cggagagttgtggactttatcgatgaaggggtgaagatcggcttggaggtgaagagtaag
accgccaagctccaggatttcaaatctttcctgctcaaggacccagaaacaagtcagcgt
ctggccaagctcaggcaacaggtggagcagtttgccagggcttttcccatgcctggtttt
gatgagcactga
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