Perognathus longimembris pacificus (Pacific pocket mouse): 125362695
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Entry
125362695 CDS
T08928
Symbol
Nup160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125362695 (Nup160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125362695 (Nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125362695 (Nup160)
03036 Chromosome and associated proteins [BR:
plop03036
]
125362695 (Nup160)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125362695 (Nup160)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125362695 (Nup160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Nup160_C
TPR_NUP160_120_M
Beta-prop_Nup120_160
NUP160_helical
HEAT_Nup120
TPR_NUP120_160
Motif
Other DBs
NCBI-GeneID:
125362695
NCBI-ProteinID:
XP_048217520
LinkDB
All DBs
Position
13:complement(49211603..49262211)
Genome browser
AA seq
1402 aa
AA seq
DB search
MAAAGSLERSFFELSGAERERPRHFREFTVCSLGTAISAAGAGKFSESAGGFYYVESGKL
FSVTRNRFIHWKTSGDTLELVEESLDINLLNNAVRLKFQNCSILPGGVYVCETQNHVMIL
ILTNQTVHRLLLPHPSRMYRSELVVESQMQSIFTDIGKVDFRDPCNYQLIPAVPGIAPNC
TTSAAWLSSDGEALFALPSAAGGIFVLKLPPYDMPGTVTVVELKQSSVMQRLLTGWMPTA
IRGDQGPSDRALSLGVHCVEHDAFIFALCQDHKLRMWSYKDQMCVMVADMLEYVPVNKDL
RLTAGTGHKLRLAYSPSMGLYLGIYIHAPKRGQFCVFQLGSIEHNRYCLDHISSLFTSQE
TLIDFALTSTEIWALWHDAENQTIVKYINFEHNVAGQWNPVFIQSLPEEDIVIRDDQDPR
EMYLRNLFIPGRFINAALCKALQIFCRRTERNLDLSWSELKKEVTLAVESELQGSVTEYE
FSQEEFRSLQKEFWSKFYACCIQYQEAFSHPLALHLNPHTNMMCLLKKGYLSFLVPSSLV
DHLYLLPDENLLTEDETSISDDVDVARDVMCLIKCLRLIKESVTMDMSALMEASCYNLQS
PEKSAERILEDLITIDVENVMEDICSKLQEIRNPVHAIGLLIREMDYETEAEMEKGFNPA
QPLNVRMNLSQLYGSNTAGHIVCKGVYKIASTRFLICRDLLILQQLLMRIGDAAILGAGQ
LFQAQQDLLHRTAPLLLSYHLIKWASQSLATDVPVDTLESNLQHLSVLELTDSGALMANK
LVSSPQTILELFFQEVARKHIIAHLFFQPKAPLSQTGLNWPEMISAITNYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEGQKALECFCQAA
SEVGKEEFLDRLIRSEDGEIVSSPRLQYYDKVLRLLDVVGLPELVIQLATSAITEAGDDW
KSQATLRTCIFKHHLDLGHNSKAYEALTQIPDSSRQLDCLRQLVVILCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMYEYGMRLGREVRT
LRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVYDRPGTSPKRNHDGESTAAPTNRQ
IEILELEDLEKECSLARIRLTLAQHDPSAVAIAGSSSAEEMVTLLVQAGLFDTAISLCQT
FKLPLTPVFEGLAFKCIKLQLGGESAQAEAWAWLAANQLSSVITTKESSATDEAWRLLST
YLERYKVQNNLYHHCVINKLLSHGVPLPNWLINSYKRVDAAELLRLYLNYDLLEEAVDLV
SEYVDAVLGKGHQYFGIEFPLSATAPLVWLPYSSIDQLLHALGENSANTHNIALSQKILV
KLEDYQQKVDKATRDLLYRRNL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctggatccctggaacgtagctttttcgagctgagcggagcagagcgtgaa
agaccaaggcacttccgcgagttcaccgtctgcagccttgggaccgcaatctcagcggct
ggtgcggggaaattcagcgagagcgcgggaggcttctactatgtggaaagcggcaagctg
ttctccgtcaccaggaacaggttcattcattggaagacttctggggatacattggagctg
gtggaggagtcactggacataaacctgttgaataatgcagttcgcctaaagttccaaaac
tgtagcattttacctggaggggtttatgtctgtgagactcagaatcatgtgatgatcttg
atattaacaaatcagacagtgcacaggctacttttaccacacccttcccggatgtatagg
agtgaattggtagttgaaagtcagatgcaatcaatattcacagacattggaaaagttgat
ttcagggatccttgcaactatcaactaattccagcagtacctggaatagcccctaattgt
accacctcagcagcctggcttagcagtgatggagaggctctgtttgctctaccatctgct
gctgggggcatctttgttcttaagctacctccttatgacatgcctgggacagtgacagtg
gtggaattgaagcagagttcggtgatgcagcgattgctcacaggctggatgccaacagct
atcagaggtgatcaggggccttcagatcgagccctcagtcttggtgttcattgtgttgag
catgatgcctttatctttgccctgtgtcaggatcataaactacgaatgtggtcttacaag
gatcaaatgtgtgtgatggtagctgacatgcttgaatatgttcctgtgaacaaagacctt
cggctcactgcagggactggtcacaaactacgacttgcttattccccttccatgggtctc
tacctaggaatatacatacatgctccaaaaagaggacaattctgtgttttccagttggga
agcattgagcataaccgctattgtctagatcacatttcctctctctttacttctcaggag
acattgattgattttgccttaacctccacggagatctgggccctatggcatgatgctgag
aaccaaacaattgtgaaatacatcaactttgaacataatgttgcaggccagtggaatccc
gtctttatacagtctctgccagaggaagatattgtcatcagagatgaccaagaccccaga
gagatgtacttgaggaatctttttataccaggacgattcataaatgcggctttatgtaaa
gctttacagattttctgccgaagaactgagagaaatctggatctttcctggagtgaacta
aagaaggaagttactttagctgttgaaagtgagctccaaggaagtgtgacagaatatgag
ttctcccaagaggagtttcgaagtttacaaaaggaattctggagcaaattctatgcctgt
tgcattcagtatcaggaagccttctcccatcctcttgccctgcatttgaacccccacacc
aacatgatgtgcctgctgaagaaagggtacctgtctttcctggtgccctcctccttagtg
gatcatttatatctcctacctgatgagaatcttctgactgaggatgagacaagcatttct
gatgatgtggatgttgctcgggacgtcatgtgtcttataaaatgtctccgactgattaaa
gaatcagtaactatggatatgtcagctctgatggaagcgagttgttataacctacaatct
ccagaaaagtctgcagaacggattttggaagatctgatcactattgatgtagaaaatgtg
atggaagatatctgtagtaaactacaagagattcggaacccagtccatgccattggactt
cttatacgagaaatggattatgaaacggaagcagaaatggaaaagggattcaacccagcc
cagcctttgaatgttcgtatgaatctttcccagctctatggtagtaacacagcagggcac
attgtctgcaaaggcgtgtataaaattgccagtacccgcttcctgatctgtcgagacctc
ctgatcttacagcagctgttaatgaggataggagatgcagcaattctaggagctggtcag
ctctttcaagctcaacaagacctgctgcatcgaacagctcccctgctcttatcttatcat
ctcattaaatgggctagtcagtccctagcaacggatgttccagttgatacactagagtca
aatctccaacatttatcagtactggaactaacagactccggtgctttaatggcaaataag
ttagtttctagccctcagacaattttggagttattcttccaagaagttgcaagaaaacac
attatagctcatctcttctttcaaccaaaggcacctctgagccaaactggattgaattgg
cctgagatgatttctgcaattaccaattacttactgcaacttttatggcctagcaatcct
ggttgtctcttcctagagtgcttgatgggaaattgccagtatgtacagttgcaggattat
attcaactgctacacccctggtgtcaagtcaacgttggctcctgtcgatttatgctgggc
cggtgttacctagttacaggagaaggacagaaggctctggaatgtttctgccaggcagca
tctgaagtaggcaaagaggaattcttagatcgcttgatccgttcagaggatggggagatt
gtgtcttcccccagactacagtattatgataaggttttacgtctactcgatgttgttggc
ttgcctgaattggttatacagttggctacgtcagcaataactgaagcaggtgatgactgg
aaaagccaggctactttaaggacatgtattttcaaacatcatttggatttgggtcacaat
agcaaagcatacgaggccttaacccagattcctgattccagcaggcagttagactgttta
cggcagctggtggtaattctttgtgaacgttcacagctacaggatcttgtagagtttccc
tatgtgaatctgcataatgaggttgtggggataattgagtcacgtgctagagctgtggat
cttatgacgcacaattactacgaacttctctatgccttccatatctatcgccataattac
cgaaaagctggcacagtgatgtatgaatatggaatgcgtcttggcagagaggttcgaact
cttcgaggactagagaagcaaggcaactgctacttggctgctattaattgcttacggctc
attcgcccagaatatgcatggattgtacagccagcatcgggagcagtgtatgatcgtcct
ggaacatcccctaagaggaatcacgatggagaatccacagctgccccaaccaatcggcaa
attgaaatcctggagctggaagatctggagaaagaatgttccttggctcgaattcgcctc
actttggcacagcatgatccatcagcagttgcaattgcaggaagttcatcagctgaagag
atggttactctcttggttcaggctggcctcttcgacactgccatatcactctgtcagact
ttcaagcttcctttaactccagtctttgaggggcttgctttcaaatgcatcaaattgcag
ttgggaggagagtctgctcaagcagaagcctgggcctggctcgcagccaatcagctctcc
tctgtcatcactactaaggaatctagtgctacagatgaagcttggcgattattgtcaact
tacctagaaaggtacaaagtccagaataacctttatcaccactgtgtaatcaacaagctt
ttgtcccatggagtgcctctgcctaattggcttataaacagttacaagagagttgatgct
gctgaattgcttcggctatacttgaactatgaccttttggaagaagctgtggatttagtc
tcagaatatgtggatgctgtgttaggaaaaggacatcagtactttggaattgagtttcca
ctgtctgcaacagccccactggtgtggctcccatactcctccattgatcagcttctccat
gctcttggagaaaacagtgccaacactcacaacatcgcactgtcccagaaaatacttgtc
aaattagaggactaccagcaaaaagttgataaggcaacaagagatttattataccgtcgg
aacttatga
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integrated database retrieval system
