Perognathus longimembris pacificus (Pacific pocket mouse): 125362714
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Entry
125362714 CDS
T08928
Name
(RefSeq) tripartite motif-containing protein 34-like
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125362714
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125362714
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
Motif
Other DBs
NCBI-GeneID:
125362714
NCBI-ProteinID:
XP_048217570
LinkDB
All DBs
Position
13:14059848..14069871
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AA seq
512 aa
AA seq
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MNPLNHLEVSKQEEHQDLEQEEANGSAMTSQILMNIQQEVTCPICLGLLKEPLSLHCGHS
FCQACITMSNEKAMMDSERESSCPVCGIRYSPENQWANQHLAGIVRKLMEVKLSPDTEQE
RHYCVHHGEKLLLFCEEDRKAICRLCERSQEHCGHHTFLLEEVVKEWQERLHSALTRLRK
EKQEAEALEANIREEKNSWKYQVQTERQRIQREFMQLRGILDYEEQRELQRLEEEEKEIL
DSLAQSEDQLAQQSQLVRELISDLEHRSQWSTTELLQDTSGIMKWSEIWTLKKPKAVSSQ
LKSMFQAPDLSGMLQEFRELRDARCYWEDFTLNSINLNLNLVLSEDQRQVQSAPIWPFKC
YNYGILGSQYFSSGKHYWEIDVTKKKAWILGVYCRKRSVRFGIRQTANNPNVYYGYKPQY
GYWVIGLQKRKYHAFEDPHVSSLTALPLFQTIPPHRIGVLLNCEARTISFFNVTGHGSLI
YRFSNCCFSQPAYPYFNPWNCPAPMTLCPPAS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaatccactaaatcacctagaagtctccaagcaagaagagcatcaagacctagaacag
gaggaagccaacggcagtgcaatgacttcacaaatcctgatgaacatacagcaggaggtg
acttgtcccatctgcctggggcttttgaaggaaccgctgagtctacactgtggccacagc
ttctgccaagcctgtatcaccatgagcaacgagaaggcaatgatggactctgaaagggaa
agcagctgtcctgtatgtggtatcagatattcacctgaaaatcaatgggctaatcagcac
ttggctggtatagtgagaaaactcatggaagtcaagttgagccctgacactgagcaggag
agacattactgtgtacaccatggagagaaactcctactcttctgtgaggaggacaggaag
gccatttgtaggctctgtgagcgttctcaggagcactgtggtcaccacaccttcctcttg
gaggaagtagtgaaggaatggcaggagaggctccacagcgccctcacccggctgagaaag
gagaagcaggaagcagaggcgttggaagctaacatcagagaagagaaaaattcttggaag
tatcaggtacagactgagagacaaaggatacaaagagaatttatgcagcttagaggaatc
ttggactacgaggaacagagggagctacagaggttggaggaagaagaaaaggagatactg
gatagcttggcacagtctgaggatcagctggctcagcagagccagttggtgagagagctc
atttcagatctggagcaccggagtcaatggtcaacaacagagctgctacaggatacgagt
ggaattatgaagtggagtgagatctggacactgaagaagccaaaagcagtttccagtcag
ctgaagtccatgttccaggccccagatctcagtgggatgctacaagagttcagagaacta
agagatgcccggtgctactgggaggacttcacattgaattccatcaacttaaacttgaat
cttgtcctttcagaagaccagagacaagtgcaatctgctccaatatggccatttaagtgc
tataactatggcatcttaggctctcaatatttctcctcagggaaacattattgggaaata
gatgtcaccaagaagaaggcctggatccttggagtgtactgtaggaaacgttcagtgagg
tttggcatccgtcaaactgcaaacaacccaaatgtttattatggatacaaacctcaatat
ggctactgggttatagggttgcagaaacggaagtatcatgcgtttgaggaccctcacgtc
tcttctcttacagctctgcccctcttccagactattcctccccatcgaattggggttctc
ctcaactgtgaagcaaggaccatctcatttttcaatgtcacaggccatgggtcactcatc
tataggttctccaactgttgcttttctcaacctgcctatccatacttcaacccttggaac
tgtccagcccccatgaccttgtgcccacctgcctcctga
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