Perognathus longimembris pacificus (Pacific pocket mouse): 125362725
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Entry
125362725 CDS
T08928
Symbol
Clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04213
Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
125362725 (Clpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
plop03110
]
125362725 (Clpb)
Chaperones and folding catalysts [BR:
plop03110
]
Heat shock proteins
HSP100
125362725 (Clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_5
Ank_3
ClpB_D2-small
AAA_5
Ank_4
AAA
Zeta_toxin
Sigma54_activat
AAA_22
Torsin
AAA_24
nSTAND3
AAA_3
AAA_14
ATPase_2
ABC_tran
RP853
YchF-GTPase_C
Motif
Other DBs
NCBI-GeneID:
125362725
NCBI-ProteinID:
XP_048217587
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All DBs
Position
13:12237638..12369790
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AA seq
707 aa
AA seq
DB search
MLASQVLRRTAPAPRLLLRLFRSQSLRSLGGVSSRRIITGHCGEPQRLRAAVGGRPLTLS
ALLPERGAPSARPLGGRSETQCLAAATWGRLPTPEETLTGQDSPNGVPYRSAVGLWALAM
ALVVDCYTKSPTGKDAALMEAARANNVQEVTRLLSEGADVNARHKLGWTALMVAAISRND
SVVQVLLAAGADPNLGDEFSSVYKTAKEQGIHSLEDGGQDGASWRITKQWTSALEFRRWL
GVPVGVLVTREDDFNNRLNNRASFKGCTALHYAVLADDFSTVKELLDGGANPVQRNEMGH
TPLDYAREGEVMKLLKSSETKYMEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAA
IRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEV
AKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGK
GKTIDCKDAIFIMTSNVASEEIAQHALQLRQEALEMSRNRIAENLGDVQMSDKITISKNF
KENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLL
WDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDSDKQL
LKSPEMPSPQAEKRLPKLRLEIIDKDSKTRKLDIRAPLHPEKVCYTI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctggcatcccaggtgttgaggaggacggcgccggcgccgcggctcctcctccggctc
tttaggtcccagtcgctccggagtcttgggggtgtctccagccggcgcataatcaccgga
cactgcggggagcctcagcggctgagagcggccgtcggggggcgccctttaacattgtca
gctttgctccccgaacgcggggcaccctccgcgcggcccctgggtggacgctccgagacc
cagtgcctggctgccgccacgtggggacgccttcctacccccgaagaaacactcacagga
caggacagcccgaatggggtcccttacagatctgcagtgggcttgtgggccctggccatg
gcgctggtggttgattgctacaccaagtctccgaccggcaaggatgcagccctgatggaa
gcagcccgagccaacaatgtacaagaagttaccagactgttgtcagaaggtgcagatgtc
aatgcaaggcacaaacttggctggacagcactgatggtggcagccatcagccgtaatgac
agtgtggtacaggtcctgcttgctgctggggctgacccaaaccttggggatgagttcagc
agtgtctacaagacggccaaagagcagggaatccattctttggaagatgggggacaggac
ggtgcaagctggcgcatcacaaaacagtggacaagtgctctggagttcaggaggtggcta
ggagtccccgttggcgtcttggtcacccgggaggatgatttcaacaaccggctgaacaac
cgtgccagtttcaagggttgcacagccctgcactatgctgtcttggctgatgacttcagc
actgtcaaagaactgcttgatggaggagctaacccggtgcagaggaatgaaatgggacac
actcctttggattatgcccgagaaggggaggtaatgaagcttctgaagtcttctgagacc
aagtacatggagaagcagcggaaacgtgaggctgaggagcggcgccgcttccccctggaa
cagcgactgaaggagcacatcattggccaagagagtgccatcgccaccgtgggggctgca
atacggaggaaagagaatggctggtacgatgaagaacaccctctggtcttcctcttcttg
ggatcatccggaataggaaaaacagaactggccaagcagacagccaagtatatgcacaaa
gatgccaaaaagggcttcatccggctggatatgtctgagttccaggagcgacatgaggtg
gccaagtttattgggtctccaccaggctacattggccatgaggagggtggccagctgacc
aagaagttgaagcagtgccccaatgctgtggtgctctttgacgaggtggacaaggcccac
ccagatgtgctcaccatcatgctgcagctatttgatgagggccggctgacagatgggaaa
gggaagaccatcgactgtaaggacgccatcttcatcatgacctccaacgtagccagtgag
gagatcgcacagcacgcgctacagctgaggcaggaagctttggagatgagccgtaaccga
attgctgaaaaccttggggacgtccagatgagtgacaagatcaccatctccaagaacttc
aaggagaatgtgattcgccccatcctaaaagctcacttccggagggatgagtttctaggg
aggatcaatgagatcgtctatttcctccccttctgccactcggaactcatccagctagtc
aacaaggaactgaacttctgggccaagagagccaagcaaaggcacaacatcacattgctg
tgggaccgcgaggtggcagacgtgttggttgatggctacaatgtacactacggagcccgc
tccatcaagcatgaggtagagcgccgcgtggtcaaccagctggcagcggcctatgagcag
gacctgctgccggggggctgcaccctgcgcatcaccgtggaggactcggacaagcagcta
ctcaagagcccggaaatgccctcaccccaggccgagaagcgtctacccaagctgcggctg
gagatcatcgataaggacagcaagacccgcaaactagacatccgggcaccgctccaccct
gagaaggtgtgctacaccatctag
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