Perognathus longimembris pacificus (Pacific pocket mouse): 125362757
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Entry
125362757 CDS
T08928
Symbol
Ssrp1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125362757 (Ssrp1)
03036 Chromosome and associated proteins [BR:
plop03036
]
125362757 (Ssrp1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
125362757 (Ssrp1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
125362757 (Ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
bPH_2
Motif
Other DBs
NCBI-GeneID:
125362757
NCBI-ProteinID:
XP_048217661
LinkDB
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Position
13:complement(52247337..52257093)
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AA seq
709 aa
AA seq
DB search
MAETLEFNDIYQEVKGSMNDGRLRLSRQGIMFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDESGEETDE
SFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRKKPVEAKK
GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDHKA
EDARREYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRSSSSKSSSRQLSESF
KSKEFVSSDESSSGENKSKKKRRRSEDSEDEELASSPPSSEDSASGSDE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacgctggagttcaacgacatataccaggaggtgaaaggctccatgaatgat
ggtcggctgcggttgagtcgccagggtatcatgttcaagaacagcaagacaggcaaagtg
gacaacatccaggctggcgagttgacagaaggcatctggcgccgggtagccctgggccat
ggacttaaactgctcacaaagaatggccatgtatacaagtatgacggcttccgagaatcg
gaattcgagaaactttctgatttcttcaaaacacattaccgccttgagctaatggagaag
gacctatgtgtgaagggctggaactggggcacagtgaagtttggtgggcagctgctttcc
tttgatattggtgaccagccagtctttgagatacccctaagcaatgtgtcccagtgcaca
acaggcaagaatgaggtaacgctggaatttcaccagaacgatgacgctgaggtgtctctc
atggaggtgcgcttctatgtccctccaacccaggaggatggcgtggaccctgtagaggcc
tttgcccagaatgtgctgtccaaggcggatgtaatccaggccactggagatgccatctgc
atcttccgggagttgcagtgtctcactccccgcggtcgttacgacattcggatttacccc
accttccttcacctgcatggcaagaccttcgactacaagattccctacaccaccgtactg
cgtctctttttgctgccccataaggaccaacgccagatgttctttgtgattagcctggat
ccccccatcaagcagggccaaacacgttaccacttcctgatcctcctcttctccaaggat
gaggatatctctttgaccctcaacatgaacgaggaagaggtggagaagcgctttgagggg
cggctcaccaagaacatgtcaggatccctctacgagatggtcagccgggtcatgaaagcg
cttgtgaaccgcaagatcacagtcccaggcaacttccagggccattcgggggcccagtgt
atcacctgctcctacaaggcgagttcgggattactctaccctctggaacgtggcttcatc
tacgtccacaagccaccagtgcacatccgctttgacgagatttcctttgtcaacttcgcc
cggggtaccactaccactcgctcctttgactttgaaatcgagaccaagcagggcacgcag
tacaccttcagcagcatcgagagggaggagtatggaaagctgtttgattttgtcaatgca
aaaaagcttaacatcaaaaaccgaggattgaaagagggcatgaacccaagctatgatgaa
tatgcagactctgatgaagaccagcatgacgcctacctggagaggatgaaggaggagggc
aagatcagagaagagaatgctaatgacagcagtgatgaatcaggagaagaaactgatgag
tcattcaacccaggtgaagaggaggaagatgtggcagaggagtttgacagcaatgcctct
gccagctcctccagcaatgagggtgacagtgaccgagaggagaagaagaggaaacagctc
aaaagggccaagatggccaaggatcgcaagagccgcaagaagcctgtagaggccaagaag
ggcaaagatcccaacgcccctaagaggccgatgtctgcatacatgctgtggcttaatgct
agtcgagagaagatcaagtcagaccatcctggtataagtatcacagatctttccaagaag
gcaggcgagatctggaagggaatgtccaaagagaagaaagaggagtgggaccacaaagct
gaagatgccaggagagaatatgaaaaagccatgaaagaatatgaaggagggcgaggcgag
tcctctaagagggacaagtcaaagaagaagaagaaagtaaaagtaaagatggaaaagaaa
tccacaccctctaggagctcatcatcgaagtcatcatcaaggcagctgagtgagagcttc
aaaagcaaagaatttgtgtccagtgatgagagctcttctggagagaacaagagcaaaaag
aagaggaggcggagtgaggactctgaagatgaggaactagccagttctcctcccagctca
gaagactcggcatcaggatcggatgagtag
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