Perognathus longimembris pacificus (Pacific pocket mouse): 125362865
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Entry
125362865 CDS
T08928
Symbol
Npas3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125362865 (Npas3)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125362865 (Npas3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
125362865
NCBI-ProteinID:
XP_048217702
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All DBs
Position
14:7977047..8816452
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AA seq
996 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAGGAAAGVPAGAGMGRAGAGANGTPQNVQGITSYQQRITAQHPL
PNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAI
TSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGIQMWKSELCMRKTPC
EGAQRRRSPSSLAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVEL
TGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSSQSETPEPVESTS
PSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIM
GLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMDLSPVDIVGKRCYHF
IHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWV
NYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDTSEDNENSKSDEKGNQSEN
SEDPEPDRKKSGNACDNDMNCNDDGHSSSNPDSRDSDDSFEHSDFENPKAGEDGFGGLGP
MQIKVERYVESESDLRLQNCESLTSDSAKDSDSAGEAGAQASSKHQKRKKRRKRQKGGSA
SRRRLSSASSPGGGGGGLDAAAAAGLVEPPRLLSSPHSASVLKIKTEISEPINFDNDSSI
WNYPPNREISRNESPYSMTKPPSSEHFPSPQGGGGGGGGAGGGGGGGGGGAGLHVAIPDS
VLTPPGADGAAARGKTQFGTSGSTALAPAVAASDPLSPPLSASPRDKHPGGGGGGGSNGG
PGASNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAEVT
LAMQGNLLPNAHAVNFVDVNSPGFGLDPKTPMEMLYHHVHRLNMSGPFGGAVSAASLTQM
PAGNVFTTADGLFSTLPFPVYSNGIHAAQTLERKED
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcatctttccggatttcagcgtgcaggtgacggccgcggcggccggcggggcg
gccgcgggggtgccggccggcgcgggcatggggagggccggcgccggggccaacggcacc
ccgcagaacgtccagggcatcacctcctaccagcagcgaataactgcccagcatcctctg
cccaaccaatcagaatgtaggaaaatctacagatatgacggaatctactgtgaatctacc
taccagaatttacaagcgttgagaaaggagaaatctcgagatgctgctcgctcccgccgg
ggaaaagaaaattttgagttctacgaattggccaagttgttgccgcttcctgctgccatc
accagccagctggacaaggcgtccatcatccgactcacaatcagctatctgaaaatgagg
gactttgccaaccagggggaccctccgtggaacttacgcatggaaggccctccacctaac
acatcagtgaaagggatacaaatgtggaaatctgaactctgcatgagaaagacaccatgt
gaaggtgcacaacgaagaaggagccccagctcactagccattgaagtatttgaagcacat
ttgggaagtcacattttgcagtccctggatggctttgtatttgcactaaatcaagaagga
aaatttttgtacatttccgaaacggtatccatctacctgggcctctcccaagtggagctg
acaggcagcagcgtctttgactatgtccaccccggagaccacgtggagatggccgagcag
ctgggcatgaagcttccgcctgggcgtggcctcctgtcgcagggcacggcggaggatgga
gccagctcagcatcttcctcttctcagtccgagacccctgagccagtggagtcaaccagc
cccagtctgctaaccacggacaacacccttgagcgctcctttttcatccgaatgaaatct
acactaaccaaacgtggtgtgcatatcaaatcatcgggatataaggtgattcacataaca
ggccggctacgcctgagagtgtcgctgtcccacgggaggactgtccccagccaaatcatg
ggtctcgtggttgtggcgcatgccttgccacctcctacaatcaacgaagtcagaattgac
tgccatatgttcgtcactcgcgtgaatatggacctcaatatcatttactgtgaaaatagg
attagtgattacatggatctgagccctgtagacatcgtagggaaacgatgctatcacttc
atccatgctgaagatgtcgagggcatcaggcacagtcacctagacttgctgaataagggt
cagtgtgtgactaaatactatcgctggatgcagaagaatggaggatatatctggatacag
tctagtgccaccatagctattaatgccaagaatgcaaatgaaaagaatatcatctgggtg
aattatctcctaagtaatcctgagtacaaggacacacccatggacatcgcgcagctcccc
catctgccagagaaaacttccgaatcctctgagacatctgactctgaatctgactctaaa
gacacctcagaggacaacgagaactccaagtccgacgaaaaggggaatcagtctgagaac
agcgaagatccggagccggaccggaaaaagtcaggcaacgcgtgcgacaacgacatgaac
tgcaacgacgacggccacagctccagcaacccggacagccgcgacagcgacgacagcttc
gagcactcggactttgagaaccccaaggccggcgaggacggcttcggggggctgggcccc
atgcagatcaaggtggagcgctacgtggagagcgagtcggacctgcggctgcagaactgc
gagtcgctcacgtcggacagcgccaaggactcggacagcgcgggcgaggcgggcgcgcag
gcctccagcaagcaccagaagcgcaagaagcggcggaaacgccagaagggcggcagcgcc
agccgccggcgcctctccagcgcctccagccccggtggcggcggcggcggcctggacgcc
gcggcggcggcgggtctcgtggaacccccgcggctgctgtcttccccccacagtgcctct
gtgctcaagatcaagacggagatctcggaacccatcaacttcgacaacgacagcagcatc
tggaactacccgcccaaccgggagatctccaggaacgagtctccctacagcatgaccaag
ccccccagctccgagcacttcccgtccccgcagggcggcggcggcggcggcggcggcgcg
gggggaggaggaggcggcggcggcggcggcgcgggcctgcacgtggccatcccggactcg
gtcctcaccccgccgggcgccgacggcgcggccgctcgcggcaagactcaattcggcacc
tcaggcagcacggccctggcccccgcggtggcggcctccgacccgctgtcgcccccgctc
tcggcgtccccgcgggacaagcaccccgggggcggcggcggcggcggcagcaatggcggc
cccggcgcgtctaactccttgctgtacactggggacctggaggcgctacagaggctacag
gccggcaacgtcgtgctccccctggtgcaccgggtgacggggaccctggcggccaccagc
acggcggcgcagagggtctacaccacgggcaccatccgctacgcgcccgccgaggtgacc
ctggccatgcagggcaacctgctgcccaacgcgcacgccgtcaacttcgtggacgtcaac
agccccggcttcggcctcgaccccaagacgcccatggagatgctttaccaccacgtgcac
cggctcaacatgtcgggacccttcggcggggccgtgagcgccgccagcctgacgcagatg
cccgccgggaacgtgttcaccaccgccgacggactcttctccacgctgcccttcccggtc
tacagcaacggcatccacgccgcacagactctggagcgcaaggaggactga
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