Perognathus longimembris pacificus (Pacific pocket mouse): 125362945
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Entry
125362945 CDS
T08928
Symbol
Brf1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125362945 (Brf1)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
125362945 (Brf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
125362945
NCBI-ProteinID:
XP_048217866
LinkDB
All DBs
Position
14:complement(62220818..62275115)
Genome browser
AA seq
690 aa
AA seq
DB search
MTGRVCRGCGGTDIELDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVSL
DGAGKTPTLGGGFHVNLGKESRAQTLQNGRRHIHHLGSQLQLNQHCLDTAFNFFKMAVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPA
IDPCLYIPRFAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
DFRRTVKEVISVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSYTAGQRK
LRMKQLEQVLSKKLEEVEGEISSYQDAIEIELENSRPRPKGALANLSKDGSVEEATSSPL
GEEDAEDEELEAAASHMNKDFYQELLAGGGGSSGAEEITEGGGRPLALESLLGPLPTAAS
LGISDPIRECISSPSLDPKLSLSDFDVHFLPEDNSEDGELDLSGIDDLEIDRYILNESEA
RVKAELWMRENAEYLREQREKEERIAKEKELGIYKEHKPKKSCKRREPILASTAGEAIEK
MLEQKKISSKINYNVLRDLDSKGGASPKREDTQPVEKASAKKVPRRKTAASRSGPDPGIN
VGKRLKPLVSSQPAKKAAIGEALLPNPPALGAEPVRPSAVLVESGPVSYHPEEDADEEDA
DEEDGEPCVSALQMMGSNDYGCDADDDDGY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgacgggccgcgtgtgccgcggctgcggcggcaccgacatcgagctggacgcggcgcgc
ggcgacgccgtgtgcaccgggtgcggctctgtgctcgaggacaacatcatcgtgtcggag
gtgcagttcgtggagaacagcggcggcgggtcgtcggccgtgggccagttcgtgtcgctc
gacggtgctggcaagaccccaaccctgggcggtggcttccatgtgaacctggggaaggag
tcaagagcacagacactgcaaaacgggcgacgccacatccaccacttggggagccagctg
cagctgaaccagcactgtcttgacacagccttcaacttcttcaagatggctgtgagcaag
catttgactcgaggccggaagatggcccacgtgatcgctgcctgcctctacctggtctgc
cgcacagaaggcacaccacacatgcttcttgacctcagtgacctgctccaggtaaatgtg
tatgtgctgggaaagacgttcctgcttttggccagggagctctgtatcaacgcaccagct
atagacccatgcctgtacatcccacgctttgcccacctgctggagtttggagagaagaac
cacgaagtgtccatgacagccctgaggctcctgcagaggatgaagagggattggatgcac
acgggccggcgcccctcaggcctctgtggagcagcacttctggttgctgccagaatgcat
gacttccggagaactgtgaaagaagtcatcagtgtggtcaaagtgtgtgagtcgacgcta
cggaagaggctcacagaatttgaagatacccccaccagtcagttgaccattgatgagttt
atgaagattgacttggaagaggaatgcgaccctccgtcatacacagctggacaaaggaag
ctgcgcatgaagcagcttgaacaagtcctgtccaaaaaattggaggaagttgaaggtgaa
atatccagttaccaggatgccattgagattgaactagaaaacagccggccaaggccaaag
ggagccctcgccaacctgtcaaaggatggttctgtcgaggaagctacgtctagcccgttg
ggtgaagaagatgctgaggatgaagagctggaggccgctgccagccacatgaacaaagac
ttttaccaggagctcctagctggtggtggcggcagttcaggagcagaagaaatcactgag
gggggtggcagacccctggccttggagtccctgcttggccccctgcccaccgcagccagc
ctgggcatctctgaccccatccgagagtgcatctcctccccgagcctggaccccaagctc
tccctaagtgatttcgatgtgcactttcttccagaagacaactcagaggatggcgagctg
gacctcagtggtattgacgaccttgagattgacaggtacatcctgaatgagtccgaagcc
cgcgtgaaggctgagctgtggatgcgggagaatgccgagtacttgcgggaacagagggag
aaagaagagagaatagctaaggagaaggagcttggcatctacaaggagcacaagcccaag
aagtcatgcaaacgccgggagcccatcttggccagcactgcaggagaggccatcgagaag
atgctggagcagaagaagatatccagcaaaatcaattacaatgtgctccgagaccttgac
agcaagggtggggccagcccaaagagggaggacactcagcctgtagagaaggccagtgcc
aagaaggtacctcggaggaaaacagcagccagcaggagcgggcctgaccctggaatcaac
gtggggaaaaggttgaagcccctggtgtcttcgcagccagctaagaaggcggccatagga
gaggccttgctcccaaaccctcctgcgctgggagcggagccagtcaggccctcggcagtt
ctggtggagagtggccctgtgtcgtaccaccctgaggaagacgcagatgaggaggatgca
gacgaggaggatggggaaccctgtgtcagtgccctgcagatgatgggcagcaatgattac
ggctgtgatgctgacgacgacgatggctactga
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