Perognathus longimembris pacificus (Pacific pocket mouse): 125362977
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Entry
125362977 CDS
T08928
Symbol
Snx6
Name
(RefSeq) sorting nexin-6 isoform X1
KO
K17920
sorting nexin-5/6/32
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125362977 (Snx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125362977 (Snx6)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125362977 (Snx6)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Macropinocytosis
Sorting nexins
125362977 (Snx6)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
125362977 (Snx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
125362977
NCBI-ProteinID:
XP_048217927
LinkDB
All DBs
Position
14:complement(9375145..9431061)
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AA seq
407 aa
AA seq
DB search
MMQEGLDDGPDFLSEEDRGLKAISVDLQSDAALQVDISDALSERDKVKFTVHTKSSLPNF
KQSEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSVRGKN
KKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTRSHK
SAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLLKYY
LRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISESAK
QELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNGDT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggaaggcctggacgacggccccgacttcctctcagaggaagaccgcggactt
aaagcaataagtgtagatctccaaagtgatgctgctctacaggtggacatctctgatgct
cttagtgaaagagataaagtaaaattcactgttcacacaaagagttcattgccaaatttt
aaacaaagtgagttttctgttgtccgacaacatgaagaatttatctggcttcatgattcc
tttgttgaaaatgaagactatgcaggttacattatcccaccagcaccaccaagacctgat
tttgatgcttcaagggaaaaactacagaaacttggagaaggagaagggtcaatgacaaag
gaggaattcacaaagatgaaacaggaactggaagctgaatatttggcaatattcaagaag
acagttgcaatgcatgaagtgttcctatgtcgtgtggcagcacatcctattttgagaaaa
gatttaaatttccatgtcttcttggaatataatcaagatctgagtgtgcgaggaaagaac
aaaaaagaaaaacttgaagatttctttaaaaacatggttaaatcagcagatggagtgatt
gtttcaggtgtaaaggatgtagatgatttctttgagcatgaacgaacattccttttagag
tatcataatcgcgttaaggatgcatctgctaagtctgataggatgacaagatcccacaaa
agtgctgcagatgattacaatagaattggttcttcactctatgctttaggaactcaggat
tctacagatatatgcaagtttttcctcaaagtttcagaattgttcgataaaacaagaaaa
atagaagcacgagtatctgctgatgaggacctcaaactttctgatctcttaaaatattac
ttaagagaatcacaagcagcaaaggatctcctatatagacggtctaggtcattagtggat
tatgaaaatgctaataaagcactggataaggcaagagccaagaataaagatgtcctgcag
gctgaaacttctcaacaattatgttgtcagaagtttgaaaagatatctgaatctgcaaaa
caagaacttatagattttaagacaagaagagttgcggcattcagaaaaaatttagtggaa
cttgcagaattagaactgaagcatgcaaagggtaaccttcagttgctccagaattgcctg
gcagtgttgaatggagacacctaa
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