Perognathus longimembris pacificus (Pacific pocket mouse): 125363141
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Entry
125363141 CDS
T08928
Symbol
Trip11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125363141 (Trip11)
Membrane trafficking [BR:
plop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
125363141 (Trip11)
Retrieval pathways
125363141 (Trip11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CEP135_TSGA10_CC
CCDC89
CLIP1
DUF4407
Motif
Other DBs
NCBI-GeneID:
125363141
NCBI-ProteinID:
XP_048218121
LinkDB
All DBs
Position
14:complement(54019679..54090839)
Genome browser
AA seq
1973 aa
AA seq
DB search
MSSWLGGLGSGLGQSLGQVGGSLANLTGQISNFTKDMLMEGTEELEDLPNSGRREIEAIH
AILRSENERLKKLCTDLEEKHEASELQIKQQSTSYRSQLQQKEVEISHLKARQIALQDQL
QKLQTAAQSVHSGAGSVTATTASSSFGYGISHHASAFHDDGMDFSDIISSQQEINRLSNE
VSRLESEVGHWKHIAQAQGTHSSDQSEICRLQNVIKELKQNLSQEIDDHQHEMSVLQNAH
QQKLTEISRRHRGELSEYEERIEELENLLHQGGSGVTSADHSKVYKMQKSIQVLQTEKVE
STKKIEELEDKIKDITKKLTSAENDREILKQEQEQLNEEKRQIIEQCESLKLECSKLQTC
ALRQSDTVMEESILPPSASVQEVRRLQQALSDAESEIMRLNSLTQESNLAEDNLKLKMHV
QMLEKEKSLLSQEKEELQVTLSKLKDEYEVIKSTASRDMNLDSELYELRLNLEAKQQELN
QSINEKETLMAELEELDKQNQEATEHVILIKDQLSKQQSEGDNIIRKLKQDLDDENKRIH
LLEEDKMSITKELDAQKEKLAHSELILNDLRLTKQKLENQVEDLIDQLSKSQENNISIQK
ENLELKENIRQNEEELSRVRNELTLNQDSNSNFKDDLLEEREAKIRSLKQNLMEVEQLNE
NLKEVSFELKTENEKLVLACENIRHQLEESIAHNKQISLEKSTIAETLQREKGQVEAELC
QAEKRLLEESSKYKQTIEELSNARNLDTSTLQLERELKIKLTQEKNSEIERLQKNIEQLE
TDHKETKEILSSNLEDQKQLAQLLNEKEIFIKKLKEKNSELQEELDKCSQTLRKNETLRQ
ALEEKDRNLGSMKEENNHLQEELERLREQHSRAVPAADQRTLDSTTELESEVSQLNIIKD
HLEEEIKHHQKIIEDQNQSKMQLLQSLQEQKKEMDEFKYQHEQMAITHTQLCLEKDEEIK
NLQKTIEQIKAQLHEERQDIQTENSDIFQKTKVQSLNIENGSEKHDLSKAETEKLVKGLE
ERELQIKLLNEKNISLTKQIDQLSKDEVGKLTQIIQQKDSEIQALHARISSTSHTQDVAY
LQQQVQAYTMEREQVFAVLNEKTRENSNLKTEYHKIMDIVAAKEAALTKLQEENKKLSAR
FESSGQDMFRETVQNLSRIIREKDIEIDALSQKCQTLLAVLQTSTPGNEVGSVNSNQFEE
LLQERDKLKQQVKKMEEWKQQVMTTVQNMQHESAQLQEELHQLQAQVLVDSDNNSKLQVD
YTGLIQSYEQNETKLKNFGQELANVQHHMGQLCNTKDLLLGKLDIMSPRLSSGSPRTSQS
PESLESGKSAGSSESSQLLQQEIEELRKSLQEKDSMIRTLQENNHRLSDSMAVSSELERK
EHEQTESEIKQLREKQDVLQNLLKEKDLLIKVKSDQLLSSNENFTNKVNENELLKQAVTN
LKERALILEMDISKLKGENEKIVETSRGKETEYQALQETNMKFSMMLREKELECNSMKEK
ALAFEQLLKEKEQGKTGELNQLLNTVKSMQEKTITFQQERDQVTLALKQKQMENSTLQNE
VQHLRDKELRLNQELQRLRNHLLESEDSYTREALAAEDREAKLRKKVTALEEKLVSSSNA
MENASHQANVQVESLQEQLNMVSKQRDETALQLSVSREQVKQYATSLANLQMVLEHFQQE
EKAMYSAELEKQKQLITEWKKKAENLEGKVLSLQERLDEANAALDSASRLTEQLDIKEEQ
LEELKKQNELRQEMLDDAQKKLMNLVNSTEGKVDKTLMRNLFIGHFHTPKTKRHEVLRLM
GSILGVKKEEMEQLFSEDQGGVTRWMTGWLGGGSKSVPNTPLRPNQQSVLNSSFSELFVK
FLETESHPSIPPPKLSVHDMKPLDSPGRRKLDANVPLSFKDGAASRTGRRADVSPFLAPR
SAAVPLIDPAGLGPGGSGHPLLKPISDVLPTFTPLPVSPDNSAGVVLKDLLKQ
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctggctcgggggcctgggctcgggcctgggccagtccctgggtcaggtcggg
ggcagcctggccaacctcacgggccagatctcgaacttcaccaaggacatgctcatggag
gggacggaggagttggaagacttacctaattctgggagaagggaaattgaagccattcat
gcaattttaagatcagagaatgaaagacttaaaaaactttgtactgatttggaagaaaag
catgaagcctcagagcttcaaataaagcaacagtctacaagttaccgaagtcagctacaa
cagaaagaggtagaaatcagccaccttaaagcaagacagattgcactacaggatcagttg
cagaaactgcagacggctgctcagtcggtgcattcaggagctggcagtgtaacagcaact
accgcgtcatcttcatttggctatgggatcagtcatcatgcttctgcatttcatgatgat
ggcatggacttcagtgatataatttcatcacaacaagaaataaacagattgtcaaatgaa
gtttccagacttgaatctgaagttggccattggaagcatattgctcaggcacaaggaaca
catagttctgatcaaagtgaaatctgcaggctgcaaaatgttattaaggaacttaaacag
aatctgagtcaggaaattgatgaccatcaacatgaaatgtcagtactgcagaatgctcat
caacagaaactgacagagataagtcgtcggcatcgaggggagttaagtgaatatgaagaa
cgaattgaagaacttgaaaacctattacatcaaggtggctctggagttacctcagctgac
cactccaaagtctacaaaatgcaaaaatctattcaagttctacaaactgaaaaagtagaa
tctacaaaaaaaatcgaagagcttgaggataaaataaaagacataactaaaaaattaact
tctgcagaaaatgacagagagatcttgaagcaagaacaagaacagttaaatgaggaaaag
agacaaataattgaacagtgtgaaagcttgaagctggaatgtagcaaactgcagacttgt
gctctgaggcagagtgacactgtgatggaggagagcatccttccaccgagtgcctcagtg
caagaagtgcgcagactacaacaagcgctgtcggatgctgaaagtgaaataatgagacta
aatagtttaacccaggaatcgaatcttgctgaagacaatctgaaacttaaaatgcatgtc
caaatgttagaaaaagagaagtcactattgagtcaagaaaaggaagaacttcaggtaaca
ctttcaaagttgaaagatgaatatgaagttattaaaagtacagcttcaagagatatgaat
ttggattcagaattgtatgagttaagacttaacttggaggcaaagcaacaagagctaaat
caaagtattaatgaaaaggaaacactgatggctgaattagaagaattggacaagcagaac
caagaagctacagagcacgtgattttgataaaagatcagctatcaaaacagcaaagtgaa
ggagacaatattatcaggaaattgaaacaagatctagatgatgaaaataagagaatccat
ctacttgaagaggataaaatgagcattactaaagagctagatgcacagaaagaaaagtta
gcccatagtgaactgatcctaaatgatttacgtttaaccaagcaaaagcttgaaaatcaa
gtagaagatttaatagatcaactaagtaaatcacaggaaaataatataagcattcagaag
gagaaccttgagcttaaggaaaacattagacaaaatgaagaggaactgtcccgagtcagg
aatgagttaactcttaatcaagattctaacagtaattttaaggatgacttacttgaagaa
agggaagccaaaattagaagcttaaagcaaaatcttatggaagtagaacagctcaatgaa
aatttaaaggaagtttcttttgaactcaaaacggaaaatgaaaagttggttttagcatgt
gagaacataagacatcagttggaagaatctattgctcataacaaacagatttctttggaa
aaaagcactattgcagaaactctgcaaagggaaaaaggacaggtagaagcagaattgtgt
caggcagaaaagaggttgctggaagagtcaagcaagtataagcaaaccattgaggaactg
tcaaatgcacggaatttggacacctctaccttacagctggaacgtgagctaaaaattaaa
ctcactcaagagaaaaactctgaaatagaaagactccagaagaatattgagcagttggag
accgatcataaagaaacaaaggaaattttgtcttctaatttagaagaccagaaacaacta
gcacaacttttaaatgagaaagaaatttttattaaaaaacttaaagaaaaaaattcagaa
ctgcaagaagaattagataaatgttctcaaaccttaagaaaaaatgaaactttaaggcag
gccctagaggagaaggacagaaatcttgggtccatgaaagaagaaaataatcatttacaa
gaagagctggaacggctcagggaacagcacagtcgagccgtgcctgcggctgatcagaga
acccttgatagtaccacagagctagaatctgaagtgtcacaactaaatataatcaaggat
catcttgaagaggaaatcaagcatcatcagaaaataattgaagaccaaaaccagagtaag
atgcaactacttcagtctttacaggagcagaagaaggaaatggatgagtttaaataccag
catgaacaaatggccatcacacatactcagctttgtttagagaaagatgaggaaattaag
aatttacaaaaaacaattgaacaaataaaagctcagttgcatgaagaaagacaagacatt
caaacagagaattctgatatttttcaaaaaacaaaagttcaaagccttaatatagaaaat
ggaagtgaaaagcatgatttatctaaagcagaaacggaaaaattagtaaaaggactggaa
gaaagagaactgcagattaaacttctaaatgaaaagaatatatctttaactaaacagatt
gaccagctgtccaaagatgaggtgggtaaactcactcagattatccagcagaaggactcg
gagatacaagcgcttcacgccaggatttcttccacttcccacacccaggatgttgcttac
ctccagcagcaggtgcaggcctacacaatggaaagagaacaggtcttcgctgtgttgaat
gagaaaacaagggaaaatagcaatttaaaaacagagtatcacaaaatcatggatatagtt
gccgccaaagaagcagccctcactaagctgcaagaagagaataaaaaattgtctgctcga
tttgaaagtagtggtcaagatatgtttagagaaacggttcagaatttatcacgtatcatt
cgagaaaaagacattgaaatagatgcactaagtcagaaatgtcagacgttattggcagtt
ttacagacttccacccctggtaatgaggttggaagtgttaatagcaatcaatttgaggag
ctcctacaggaacgcgataagttaaagcaacaagtaaagaaaatggaagagtggaaacaa
caggttatgaccaccgtccaaaacatgcagcacgagtcagctcagcttcaggaagaactt
caccagcttcaggcccaagttttggttgacagtgataataattctaagctgcaagtggat
tacacgggcctgatccaaagttacgagcagaatgaaaccaaactcaaaaactttggccag
gaattagccaatgtgcagcaccacatggggcagctttgcaataccaaggatcttctttta
ggaaagcttgacattatgtcaccccggctctcttccggctccccgcgtacctcgcagtca
ccagagtctcttgaatcaggtaagtctgctggatcaagtgagtcttctcagttgcttcaa
caagagattgaagagttgagaaagtcactgcaggaaaaagattccatgattagaactctc
caagaaaataatcacaggttgtctgattccatggctgtctcctcagagctggagcggaaa
gaacatgaacaaactgagtcagaaattaagcagttgagggagaaacaagatgtgttacaa
aacttactgaaggaaaaagacctcttaatcaaagtcaaaagtgatcagttactttcttca
aatgaaaattttactaacaaagtgaatgaaaatgaacttttgaaacaagcagtcacaaac
ctgaaagaaagagcattaattttagaaatggatatttctaaactaaagggggaaaatgaa
aaaatagtagaaacatccaggggaaaggaaacagagtatcaagcattacaagagactaac
atgaagttttctatgatgctgcgagaaaaagagttggagtgcaattcaatgaaggagaag
gcccttgcttttgagcagttactgaaagaaaaggaacagggcaagactggggagttgaat
cagcttttaaatacagttaaatcaatgcaggagaagacaattacatttcagcaggaaaga
gaccaagtcacattggccctgaagcagaaacaaatggaaaacagcaccctccagaatgag
gttcagcacttacgagacaaagaattacgattaaaccaggagctacagagattacgtaac
catcttttagaatcagaagattcttatacccgggaagctctggctgcagaagatagagag
gctaaactgagaaagaaagtcacagctttggaggaaaagctagtctcatcctctaatgca
atggaaaatgcaagtcatcaggccaacgtgcaggtagagtccttgcaagaacagttgaac
atggtctccaagcaaagggatgaaactgcattacagctttctgtctctcgggaacaagta
aagcagtatgctacatcattagccaatctgcagatggtcctagaacacttccaacaagag
gaaaaagctatgtattctgctgaattagaaaagcaaaaacagcttataactgaatggaaa
aagaaggcagaaaatctggaaggaaaagtgttatcattgcaggaacgtttggatgaagca
aatgctgcactggattcagcatcaagacttacagagcagttagatataaaggaagagcaa
cttgaagaacttaaaaaacaaaatgagcttcgacaagaaatgctggatgatgcacaaaag
aaattgatgaatttagtaaacagtacagaaggaaaagtggacaaaaccctcatgagaaac
ctcttcattggtcatttccacacaccaaaaactaagcgccatgaagtattacgattgatg
ggaagcatactaggtgttaaaaaagaagaaatggaacagttgttcagtgaagaccaagga
ggtgttactaggtggatgacgggatggcttggaggaggatcaaaaagtgttcccaacaca
cctttgagaccaaatcagcaatctgtgcttaatagttctttttcagaactttttgttaaa
tttctagaaacagagtctcacccgtctattccaccaccaaagctttctgttcatgacatg
aaacctctggattctccaggaaggaggaaactagatgcaaatgtacccctaagttttaaa
gatggcgcagcgtccaggactggaagaagagcagatgtgagccctttcctggctccccgc
tccgcagcggttcctctcattgaccccgctgggcttggacccggagggtcaggccatcct
ctcctgaagcccatctcagatgttctgcccacctttacacccttgccagtgtcgcctgac
aacagcgctggtgttgtgctgaaagacctgttaaagcagtag
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integrated database retrieval system
