Perognathus longimembris pacificus (Pacific pocket mouse): 125363181
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Entry
125363181 CDS
T08928
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125363181 (Pnn)
03015 mRNA surveillance pathway
125363181 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125363181 (Pnn)
03041 Spliceosome [BR:
plop03041
]
125363181 (Pnn)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125363181 (Pnn)
Spliceosome [BR:
plop03041
]
Complex C
Other components
EJC/TREX
125363181 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
125363181
NCBI-ProteinID:
XP_048218204
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All DBs
Position
14:12918541..12928653
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AA seq
721 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRLEFAEQINKMEARPRRQTMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEVGGIVHSDAEKEQEEEEPK
QEMEVKMEEETEARESEKQQDRQPEEVMDVLEMVENVQTVIPEQEVMEVMEANQVASIEP
SENETSKELEPEMEFEVEPDKECKSLSPAKENVSILEVEKESEEKEEKESEPQPEPVAQP
QSLPPPQPQSQPQQVQQAQALAQPEPLPLAISQAPPQVIQEQENQLPERKAFPVEPVKLT
EVPLVEPVVTVHSESKSKTKTRSRSRGRVRKKTSKSRSGSSSSSSSSSSSTSSSSGTSSS
SGSSSSRSSSSSSSSTSGSSSRDSSSSTTSSSESRSRSRGRGHNRDRKHRRSMDRKRRDT
SGLERSHKSSKGGSSRDTTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggaacagctcgaaaaggccaaagagagcctaaag
aacgtagatgaaaacatccgcaagctcaccgggcgagatccgaatgacgtgagacctatc
caagcccgattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggagagcgtcggacaaggagagaatcacgccaagaaagc
gacccagaggatgatgatgttaagaagccagcactgcagtcttcagttgtagctacctcc
aaagaacgcacacgcagagaccttatccaggatcaaaatatggatgaaaagggaaagcag
aggaatcgacgaatatttggcttgttgatgggtactcttcagaaatttaaacaagaatct
acagttgctactgaaaggcaaaagagacgccaggaaattgaacaaaaacttgaagttcag
gcagaagaagaaaggaagcaagttgaaaatgagaggagagaactgtttgaagagagacgt
gctaaacagacagaactgcggcttttggaacagaaggttgagcttgcacagctgcaagaa
gaatggaatgaacataatgccaagataattaaatatataagaactaagacaaagccccat
ttattctatattcctggaagaatgtgtccagctacccaaaaactaatagaagaatcacag
agaaaaatgaatgctttatttgaaggtagacgcctcgaatttgcagaacaaataaataag
atggaggctaggcctagaagacagacaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaggcaggagaagaagaggaaaag
gaagtaggtggtatagtgcatagtgatgcagagaaagaacaggaggaggaggagccaaaa
caggaaatggaggttaagatggaggaggaaacagaggcaagggaaagcgagaaacaacag
gataggcagcctgaagaagtaatggatgtgctagagatggttgagaatgtccaaactgta
attcctgagcaggaagtgatggaagtgatggaagcgaatcaagttgcaagtatagagcct
tcagaaaatgaaactagcaaagaattggagccagagatggaatttgaagttgagccagat
aaagaatgtaaatctctttctccagcaaaagagaatgttagcattctagaagtggaaaag
gaatctgaggaaaaagaagaaaaagaatctgaaccccaacctgagcctgtggctcagcct
cagtccctccctccaccccagccccagtctcagccccagcaagtccagcaagcccaggct
ctcgctcagcctgagcctttgcccttagctatttcacaggcaccacctcaggttattcag
gagcaagagaatcaactacctgagaggaaagcctttcctgttgagcctgtaaagctcact
gaagtgcccctagtggagccagttgtaacagtgcactcagaaagcaaaagtaaaaccaaa
accaggagccgaagtagaggtcgagttagaaagaaaacaagcaagagtagaagtggaagt
agtagcagcagtagttctagtagcagttcaaccagtagcagcagcgggaccagttctagc
agtggcagcagtagcagtcgaagcagttctagtagtagctccagtacaagtggtagtagt
agcagagatagtagcagcagcactactagtagcagtgagagtagaagtcgaagtaggggc
cggggacacaatagagacaggaagcatagaaggagcatggatcggaagcgaagggataca
tcaggattagaaagaagtcacaaatcttcaaaaggtggtagtagtagagatacaacaaaa
ggatcgaaggataagaattcccggtctgacagaaagaggtctatatcagagagtagtcga
tcgggcaaaagatcttcaagaagtgagagagaccgaaaatcagacaggaaagacaaaagg
cgttaa
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