KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125363317
Entry
125363317         CDS       T08928                                 
Name
(RefSeq) DNA polymerase beta-like
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03410  Base excision repair
plop05166  Human T-cell leukemia virus 1 infection
plop05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125363317
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    125363317
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    125363317
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plop03400]
    125363317
Enzymes [BR:plop01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     125363317
DNA repair and recombination proteins [BR:plop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     125363317
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     125363317
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_B_thumb DNA_pol_lambd_f HHH_5 KH_BICC1_1st
Other DBs
NCBI-GeneID: 125363317
NCBI-ProteinID: XP_048218415
LinkDB
Position
14:complement(31342991..31344464)
AA seq 335 aa
MSKRKAPQETLNEDITDMLMELANFEKNVSQAIHKYNAYRKAASVIVKYPHKIKSGAEAK
KLPGVGTKISEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGSSAARKFVDEGIK
TLEDTRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGS
FRRGAESSGDMHVLLTHPNFTSESTKQPKLLHRVVEQLQKMHFITDILSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagtaagcggaaggcacctcaggagactcttaacgaggacatcaccgacatgctcatg
gaacttgcaaactttgagaagaacgtgagccaggccatccacaaatacaatgcgtacaga
aaagcagcatctgttatagtaaagtatccacacaaaatcaagagtggagcagaagctaag
aaattgccaggagtaggaacaaaaatttcagaaaagattgatgagtttttagcaactgga
aaattgcgtaaactggaaaagattaggcaggatgatacaagttcatccatcaatttcctg
actcgagttagtggcattggttcatctgctgcaaggaagtttgtagatgaaggaattaaa
acattagaagataccaggaaaaatgaagataaattgaaccatcatcaacgaattgggctg
aaatattttgaggactttgagaaaagaatccctcgcgaagagatgttacaaatgcaagat
attgtactaaatgaggttaaaaaagtggattctgaatacattgctaccgtctgtggcagt
ttcagaagaggtgcagagtccagtggtgacatgcatgttcttctgacccacccaaacttc
acctcagagtcaactaaacagcccaagttgttacatcgagttgtggaacagttacaaaag
atgcattttattacagatattctgtcaaaaggggaaacaaagttcatgggtgtctgtcag
cttcccagtaaaaatgatgaaaaggaatatccccacagaagaattgatatcagattgata
cccaaagatcaatattactgtggtgttctctacttcactggcagtgacattttcaataag
aacatgagagctcatgccctagaaaagggtttcacaattaatgaatataccatccgtcct
ttgggagttactggagttgctggagaacccttgccagtagatagtgagaaagatatcttt
gactatatccagtggaaataccgtgaacccaaggatagaagtgaatga

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