Perognathus longimembris pacificus (Pacific pocket mouse): 125363345
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Entry
125363345 CDS
T08928
Symbol
Psma6
Name
(RefSeq) proteasome subunit alpha type-6
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03050
Proteasome
plop05010
Alzheimer disease
plop05012
Parkinson disease
plop05014
Amyotrophic lateral sclerosis
plop05016
Huntington disease
plop05017
Spinocerebellar ataxia
plop05020
Prion disease
plop05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
125363345 (Psma6)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125363345 (Psma6)
05012 Parkinson disease
125363345 (Psma6)
05014 Amyotrophic lateral sclerosis
125363345 (Psma6)
05016 Huntington disease
125363345 (Psma6)
05017 Spinocerebellar ataxia
125363345 (Psma6)
05020 Prion disease
125363345 (Psma6)
05022 Pathways of neurodegeneration - multiple diseases
125363345 (Psma6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125363345 (Psma6)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
plop03051
]
125363345 (Psma6)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
125363345 (Psma6)
Peptidases and inhibitors [BR:
plop01002
]
Threonine peptidases
Family T1: proteasome family
125363345 (Psma6)
Proteasome [BR:
plop03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
125363345 (Psma6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
125363345
NCBI-ProteinID:
XP_048218466
LinkDB
All DBs
Position
14:9877024..9893993
Genome browser
AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
ALAERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtggttccagcgccggtttcgaccgccacattaccattttttcgcccgagggc
cggctctaccaagtagaatatgcatttaaggccattaaccagggtggcctcacatcagta
gctgtcagagggaaagactgcgcagtaattgtcacacagaagaaagtacctgacaaatta
ttggattctagcacagtgactcatttgttcaagataactgaaaacattggttgtgtaatg
actggaatgacagctgacagcagatcccaggtacagagggcacgctacgaggcagctaat
tggaaatacaagtatggctatgagattcccgtggacatgctatgtaaaagaattgctgat
atttctcaagtctacacacaaaatgctgaaatgaggccacttggttgttgtatgatttta
attggtatagatgaagaacaaggccctcaggtgtacaagtgtgaccctgcaggttattac
tgtgggtttaaagctactgcagcaggagttaaacaaacggagtcaaccagcttccttgaa
aaaaaagtaaagaagaaatttgactggacatttgaacagactgttgaaactgcaattacc
tgcttgtctactgttctgtcaattgacttcaaaccttcagagatagaggttggagtagtt
acagttgaaaatcctaaattcaggattcttacagaagcagaaattgatgctcaccttgtt
gctctagcagagagagactaa
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integrated database retrieval system
