Perognathus longimembris pacificus (Pacific pocket mouse): 125363380
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Entry
125363380 CDS
T08928
Symbol
Samd4a
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125363380 (Samd4a)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125363380 (Samd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
125363380
NCBI-ProteinID:
XP_048218507
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Position
14:24581886..24812109
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AA seq
717 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCTELHVLEG
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPQILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGSQNRGRSDSVDYGQTHYYHQR
QNTDDKLNGWQNSRDSGICINASSWQDKSLGCENGHVPLYSSSSVPTTINTIGTSTSTIL
SGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASS
GSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQL
EAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYSS
PNATPEARHQEPPVPHQPSLMGPESQGPDCKDGPVASASASAAAGASGGLQPHPLSSCDG
ELAVAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKKR
LLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRSFGQSNSLPTAGSVGGGMGRRNPRQYQI
PSRNVPSARLGLLGTSGFVSSNQRHATANPTIMKQGRQNLWFANPGGSNSMPSRTHSTVQ
RTRSLPVHTSPQNMLMFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtcggggtgctggcgggctggtttaagggctggaacgagtgc
gagcagactgttgcgctgctatcgctgctgaagcgcgtgagccagacccaggctcgcttc
ctccagctctgcctggagcactcgctggccgactgcaccgagctacacgtcttggaaggc
gaggccaacagcccgggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tccctcctgttaactcacctgcctttgctgaagccaggaaaccttgacgcaaaagtagag
tatatgaaactgctgccccaaatcctggctcactcaattgaacacaaccagcatattgag
gagagcaggcagctgctgtcctatgctttgatccacccagccacatcgctggaagaccgc
agtgctctggccatgtggctgaatcacttggaggaccgcacatctaccagctttggcagc
cagaaccgtggccgttcggactctgtggattatggacagacgcactactatcaccaaaga
cagaacaccgatgacaagctcaacgggtggcagaactctcgggattctgggatttgcatc
aatgcctccagctggcaggacaaaagcctggggtgtgagaatggtcacgtgcccctctac
tcctcctcatccgtccccaccacaatcaatacaattggaaccagcacaagtacaattctc
tcaggccaggcacaccacagccctttgaaacgatctgtgtcccttaccccacccatgaat
gtgccaaaccagcctctaggacatggatggatgtctcatgaggacttacgagctagagga
ccccagtgcctcccatccgatcatgcccccctgtctccacaaagcagtgtagcctcttca
ggaagtggagggagtgaacacttagaagatcagaccactgctcgtaacacattccaagaa
gaaggtagtggtatgaaagatgttccagcctggttaaaaagcctccgcctgcacaagtac
gctgcgcttttctcccagatgacctatgaggaaatgatggccctcactgagtgccagctg
gaagctcagaacgttaccaaaggtgcaagacacaaaattgtcatcagtattcagaagctc
aaagaaagacagaacctcctgaagtctttggaaagggatataattgaggggggaagcctg
cgcatccccctccaggagctccaccagatgatcctgacgcccatcaaggcctacagctcc
ccgaacgccaccccggaggctcgccaccaggagccaccggtgccgcaccagccttcgctg
atggggcctgaaagccagggccctgactgcaaggacggcccggtggccagcgcctcggcc
agcgccgctgcgggggccagtggcgggctgcagccgcacccgctgagcagctgcgatggg
gagttggcggtggcccccctgccggagggggacctgcctgggcagttcacccgcgtcatg
ggaaaagtgtgcacacagctcttggtctccagacctgatgaggaaaatataagttcctat
ttacagctcatagacaagtgtctcattcatgaggcatttacagagacgcagaaaaaaaga
ttgttgtcatggaaacagcaggtgcagaagctctttcggtccttccctcggaaaaccctt
ctagacatatcaggatatcgacagcaaagaaatcgaagctttgggcaatctaactccctc
ccaacggccggctctgtgggcggtggcatgggcagacggaacccacgccagtatcagatc
ccttctcgcaatgtcccctctgcccgcctgggtctcttgggcaccagtggatttgtcagc
tccaaccagcgccacgccacagccaaccccaccatcatgaagcaaggaagacagaacctg
tggttcgcaaacccagggggcagcaacagcatgcccagccgcacgcacagcaccgtgcag
aggacccgctcgctgcccgtgcacacttcgccacagaacatgctgatgttccagcagcca
gaattccagcttcctgtgactgaacctgacatcaataatcggctggagtccctgtgcctc
agtatgaccgagcacgccctgggagacggggttgaccggacctccacaatctag
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