Perognathus longimembris pacificus (Pacific pocket mouse): 125363500
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Entry
125363500 CDS
T08928
Symbol
Psmb5
Name
(RefSeq) proteasome subunit beta type-5
KO
K02737
20S proteasome subunit beta 5 [EC:
3.4.25.1
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03050
Proteasome
plop05010
Alzheimer disease
plop05012
Parkinson disease
plop05014
Amyotrophic lateral sclerosis
plop05016
Huntington disease
plop05017
Spinocerebellar ataxia
plop05020
Prion disease
plop05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
125363500 (Psmb5)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125363500 (Psmb5)
05012 Parkinson disease
125363500 (Psmb5)
05014 Amyotrophic lateral sclerosis
125363500 (Psmb5)
05016 Huntington disease
125363500 (Psmb5)
05017 Spinocerebellar ataxia
125363500 (Psmb5)
05020 Prion disease
125363500 (Psmb5)
05022 Pathways of neurodegeneration - multiple diseases
125363500 (Psmb5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125363500 (Psmb5)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
plop03051
]
125363500 (Psmb5)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
125363500 (Psmb5)
Peptidases and inhibitors [BR:
plop01002
]
Threonine peptidases
Family T1: proteasome family
125363500 (Psmb5)
Proteasome [BR:
plop03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
125363500 (Psmb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
DUF3991
Motif
Other DBs
NCBI-GeneID:
125363500
NCBI-ProteinID:
XP_048218732
LinkDB
All DBs
Position
14:complement(944220..949957)
Genome browser
AA seq
268 aa
AA seq
DB search
MALASVAERPRPLPEGRRGFFGLGGRADLADLADLGPGSPSGGLSLAAPAWGAPEEPRIE
MLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWE
RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS
EGNRISGAAFSVGSGSVYAYGVMDRGYSYDLEVAAAYDLARRAIYQATYRDAYSGGSVNL
YHVREDGWIRVSSDNVVDLHEKYSKSIP
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccagtgtggcggagcggccgcggccgctgcccgagggccgccggggcttc
tttggcctcggaggtcgggcggacctggcggacctggcggacctgggtccggggagtccc
agcggcgggctgagcctggctgcgcccgcctggggcgcccccgaggagccgcgaatcgag
atgcttcacggcaccaccacgctggccttcaagtttcgccatggagtcattgttgcagca
gactctcgggccacagctggggcttacattgcttcccagactgtgaagaaagtaatagag
atcaacccctaccttctgggcaccatggctgggggtgcagcggattgcagcttctgggag
cggctgttggcccggcagtgtcgaatctatgagcttcgaaataaggaacgcatctccgtg
gcagctgcctccaaacttcttgccaatatggtgtatcagtacaaaggcatggggctgtcc
atgggcaccatgatctgtggctgggataagagaggccctggcctgtactacgtggacagc
gaagggaaccggatttctggtgctgccttttctgtaggttctggctctgtgtatgcctat
ggggtcatggatcgaggctactcctatgacttggaagtggctgcggcctatgatctggcc
cggcgggccatctaccaagctacctacagagacgcctactcgggaggttcagtcaacctg
taccacgtgcgtgaagacggctggatccgcgtctccagtgataatgtagtcgatctgcat
gagaagtacagcaagtctatcccttga
DBGET
integrated database retrieval system
