Perognathus longimembris pacificus (Pacific pocket mouse): 125363516
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Entry
125363516 CDS
T08928
Symbol
Carmil3
Name
(RefSeq) LOW QUALITY PROTEIN: capping protein, Arp2/3 and myosin-I linker protein 3
KO
K20493
leucine-rich repeat-containing protein 16
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125363516 (Carmil3)
Membrane trafficking [BR:
plop04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
125363516 (Carmil3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
DUF7605
DUF1389
Motif
Other DBs
NCBI-GeneID:
125363516
NCBI-ProteinID:
XP_048218756
LinkDB
All DBs
Position
14:1562214..1579135
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AA seq
1366 aa
AA seq
DB search
MAKAGAELTRELQDSIRRCLSQGAVLQQHRVKLETKPKKFEDRVLALTSWRLHLFPLKVP
AKVESSFNVLEIRAFNTLSQNQVLVETERGVVSMRLPSAESVDQVTRHVSSALSKVCPGP
GCLIRRGNADTPEGPRDTSPNSETSTSTTHSVCGGFSETYAALCDYNGLHCREEVQWDVD
TIYHAEDNREFNLMDFSHLESRDLALMVAALAYNQWFTKLYCKDLRLGSEVLEQVLHTLS
KSGSLEELVLENAGLKTDFVQKLAGVFGENGSCVLHALTLSHNPVEDKGFLSLSQQLLCF
PTGLTKLCLAKTAISPRGLQALGQTFGANPAFASSLRYLDLSKNPGLLATDEASALYSFL
AQPNALVHLDLSGTDCAVDLLLGALLHGCCAHLTYLNLARNSCSHRKGREAPPAFKQFFS
SAYTLSHVSLSSTRLPLEALRALLQGLSLNSHLSDLHLDLSSCELRSAGAQALQEQLGTV
TCVGSLDLSDNGFDSDLLTLVPALGKNKSLKHLFLGKNFNVKAKTLEEILHKLVQMIQEE
DCSLQSLSVADSRLKLRTSILINALGSNTCLAKVDLSGNGMEDIGAKMLSKALQINSSLR
TILWDRNNTSALGFLDVARALESNHTLRFMSFPVSDISQAYRSAPERTEDVWQKIQWCLV
RNNHSQTCPQEQAFRLQQGLVTSSAEQMLQRLCGRVQEEVRALRLCPLEPVQDELLYARD
LIKDAKNSRALFPSLYELGHVLANDGPVRQRLESVASEVSKAVDKELQVILESMVSLTQE
LCPVAMRVAEGHNKMLSNVAERVTVPRNFIRGALLEQAGQDIQNKLDEVKLSVVTYLTNS
IVDEILQELYHSHKSLARHLTQLRTLSDAPGGPGQGQDPSSRGRGRNHDHEETTDDELGT
NIDTMAIKKQKRCRKIRPVSAFISGSPQDMEPQLSGLGXPPGWFSGLGGSQSTAGGSWEG
LSELPTHGYKLRHQTQGRPRPPRTTPPGPGRPAAPLPGARQGNGTATRLDEGLEDFFSRR
VMDESSSYPRTLRTVRPGLAEPPLPPLQKKRRRGLFHFRRPRSFKGDRGPGSPTAGLLLP
PPPPPPPTQESPPSPDPPSLGNNSSPCWSPEDESALLPGLGGSRGPSFRRKAAAEGTEPG
EGGPAPGTAQPPRAPGVALPGLGRAKGWSFDGKREGPGPDLEDSTQAWQRRRSSDDAGPG
AWKPPPPPQSTKPSFSTMRRAEATWHIAEESAPHHSCPSPSPASREGEEEAERAPLPDRT
APARNAKLQDPPPAPRPPKPVAVPRGRKAAQVPGSREDAPGASQPPPGTGPQDPEEPDAA
AGPPDPGRRTAPLKPKRTRRAQSCDKLEPDRRRPPELAGAGEPGTG
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagccggcgcggagctcacccgcgagctgcaagacagcatccggaggtgcctg
agccagggagccgttctccaacaacaccgtgtgaagctggagaccaaacccaagaagttt
gaggaccgagtgctggccctgacctcctggcgcctccacctcttcccccttaaagttcct
gccaaggtggagagctccttcaatgtcctggagatccgtgccttcaacacgctcagtcag
aaccaggtcttggtggagacggagcgtggcgtggtgagcatgcggctgccgtcagctgag
agtgtggaccaggtgacgcggcacgtgagctctgccctctccaaggtctgccccggcccg
gggtgtttgatccggcgtgggaatgcagacaccccggaggggccccgagacacgtccccc
aactctgagacttccacatctaccactcacagtgtgtgtggtggcttctccgagacctac
gccgccctgtgcgactacaacgggctgcactgtcgggaggaggtgcagtgggacgtggac
accatctaccacgctgaggacaaccgcgagttcaatcttatggacttcagccacctcgag
agccgagacctggccctcatggtagcggccctggcctacaaccagtggttcaccaaactg
tactgcaaagacctgcggctgggctcagaagtgctagaacaggtgctacataccctgagc
aagtcggggagcctggaagagctcgtgctggagaacgcaggactgaagacggactttgtg
cagaagctggccggggtgtttggggagaacgggagctgtgtgctgcacgccctcactctg
tcccacaaccccgtcgaggacaagggtttcctcagtctgagccagcagctcctctgcttc
cccaccggcctcaccaagctctgcctggccaagacggccatctcccctcgagggctccag
gcgctgggccaaaccttcggagccaacccagccttcgccagctccctccggtacctggac
ctgagcaagaaccccgggctgctcgccaccgacgaggccagcgccctctacagcttcctg
gcccagcccaatgccttggtgcatctggacctctcggggacggactgtgcggttgacttg
cttctgggtgccctcctccacggctgctgcgcccacctcacctacctcaacctggctcgc
aacagctgctcccacaggaaaggccgggaggccccgccggccttcaagcagttcttcagc
agcgcctacaccttgagccacgtcagcctgtcctccacgcggctgcccctggaggccctg
agggcgctgctgcagggcctctccctcaacagccacctcagcgacctgcacctggacctc
agcagctgcgaactccgctcggcaggggcgcaggccctgcaggagcagctggggaccgtg
acttgtgtgggcagcctggatctgtcggacaacgggttcgactccgacctcctgaccctg
gtgcccgcgctgggcaagaacaagtccctcaagcacctgtttctgggcaagaacttcaat
gtcaaggccaagaccctggaggagatcctccacaagctggtgcagatgatccaggaggag
gactgttccctgcagtccctgtctgtggccgactcccggctgaagctgcgcaccagcatc
ctcatcaacgccctgggcagcaacacgtgcctggccaaggtggacctgagcggcaacggc
atggaggacatcggggccaagatgctgtccaaggccctgcagataaactcctccctccga
accatcctgtgggaccggaacaacacctccgccctgggcttcctggacgtcgccagggct
ctggagagcaaccacacgctgcgcttcatgtccttcccggtgagcgacatctcgcaggcc
taccgcagcgcgcccgagcgcaccgaggacgtctggcagaagatccagtggtgcctggtg
cgcaacaaccactcgcagacgtgcccccaggagcaggcgttccggctgcagcagggcctg
gtgaccagcagcgccgagcaaatgctgcagcggctgtgcgggcgcgtgcaggaggaggtg
cgcgccctgcggctgtgcccgctggagcccgtgcaggacgagctgctctacgcgcgggac
ctcatcaaggacgccaagaactcacgggcgctgtttcccagcctctacgagctgggccac
gtgctggccaacgacgggccggtgcgacagaggcttgagtccgtggccagcgaggtgtcc
aaggcggtggacaaagagctgcaggtgatcctggagtccatggtcagcctgacgcaggag
ctgtgtccggtggccatgcgggtggccgaggggcacaacaagatgctgagcaacgtggcc
gagcgcgtcaccgtgccccgcaacttcatccgaggggcgctgctggagcaggccgggcag
gacatccagaacaagctggacgaggtgaagctgtcggtcgtcacctacctgaccaactcc
atcgtggatgagatcctgcaggagctgtaccactcgcacaagagcctggctcgccacctc
acccagctgaggacgctgtcagacgcccccgggggaccgggccaggggcaggatccgtcc
tcccgaggccgaggccggaaccacgaccacgaggagaccaccgacgacgagctggggacc
aacatcgacaccatggccatcaaaaagcagaagcgatgcaggaagatccggcccgtgtcc
gctttcatcagcggcagccctcaggacatggagccgcagctgagcggcctgggcngtccc
ccgggctggttctcgggcctcggcggcagccagtccacggccggcggctcctgggaaggc
ctgtccgagctgcccactcacggctataaactgaggcaccaaacgcaggggaggccccgg
ccccccaggaccacccccccgggacccggccggcccgcagcccccctgcccggcgcgcgg
caggggaacggcacggccacccgcctggacgaggggctggaggacttcttcagccgaaga
gtcatggatgaaagttccagctaccctcggacgctgaggaccgtgcggcccggcctcgcg
gagcccccgctgcccccgctccagaagaagaggcggcgaggcctgttccacttccgccgg
ccacggagcttcaaaggcgaccgggggccggggtcccccaccgccggactcctcctccct
ccacccccccctccgcccccgactcaggagagcccgcccagcccggaccccccgagcctc
ggcaacaactcctctccctgctggagccccgaggacgagagcgccctcctgcccgggctg
ggcggcagcagggggccttccttccgcaggaaggcggccgccgaggggaccgagcccggg
gaggggggcccggcgcccgggaccgcacagccgcccagagcccccggcgtggcccttccc
ggcctaggaagggccaagggctggagcttcgacggaaaaagagagggcccgggcccagac
ctggaggacagcacccaggcttggcagaggcggcgctcctcggacgacgcagggcccgga
gcctggaagccccctccgccaccccagagcaccaagcccagcttcagcaccatgcgccgg
gccgaggccacgtggcacatcgctgaagagagcgccccccaccacagctgcccgagcccc
agcccggcctcccgggagggagaggaggaggcggagcgggccccgctccccgacaggacg
gcgccagcgaggaacgccaagctgcaggacccccctccggccccgcgaccccccaagccg
gtggccgtccccaggggccggaaggccgcccaggtgcccgggagcagggaggacgccccc
ggagccagccagcccccgcccgggacgggcccgcaggaccccgaggagcccgacgccgcc
gcaggaccccccgacccgggccgccggacagcccccctgaagcccaagcggacgcgccgg
gcacagtcctgcgacaaactggagcccgacagaaggcggccccctgagctcgcaggagcc
ggcgagccgggcaccggctga
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