KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125363644
Entry
125363644         CDS       T08928                                 
Symbol
Wdhd1
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:plop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:plop03036]
    125363644 (Wdhd1)
Chromosome and associated proteins [BR:plop03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    125363644 (Wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Beta-prop_THOC3 Beta-prop_IFT122_1st Ctf4_C Beta-prop_WDR5 HMG_WDHD1 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd EIF3I WDR55 WDR90_beta-prop_4th eIF2A Beta-prop_EML WD40_Gbeta Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N HMG_box Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_Nup120_160 Beta-prop_TEP1_2nd Beta-prop_VPS8
Other DBs
NCBI-GeneID: 125363644
NCBI-ProteinID: XP_048218905
LinkDB
Position
14:complement(24959981..25020540)
AA seq 1123 aa
MPATLKPVRYGHTEGHTDVCFDDSGSCIVTCGSDGDVRIWEDLDDDDPKSINVGEKAYSC
ALKNGKLVTAVSNNTVQVHTFPEGAPDGILTRFTTNANHVIFNGDGTKIAAGSSDFLVKI
VDVVDCSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSVRVWHISNQTCAISWPLLQKC
NDVVNAKSICRLAWQPQSGKLLAIPVEKSVKLYRRETWSNQFDLSDSFISQTLNIVTWSP
CGQYLAAGSINGLIIVWNVETKVCMERVKHEKGYAICGLAWHPTCGQISYTDAEGNLGLL
ENVCDSSGKTSGSKVSSRVEKDYNDLFDGDDTSNPGDFLHDSAVEVPSSSKGVLDDDDDD
LTLASSRSRHRGHILEDDENSVDVTMLKNELLKEEEDDDQAGSSHNLPLVTSQRPFYDGP
MPTPRQKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATHLSNT
LNYTVADLSHEAILLASESTDELASKLHCLHFSSWDSSKEWMVDMPQHEDIEAICLGQGW
AAAATSALLLRLFSIGGVQKEIFSLPGPVVSMAGHGEQLLIVFHRGTGFDGDQCLGVQLL
ELGKMKKQILLGNPLPLTRKSYLAWVGFSAEGTPCYVDSEGCVRMLNRGLGNTWTPICNT
REHCKGKSDHYWVVGIHEHPQQLRCIPCKGSRFPPTLPRPAVAILSFRLPYCQIATEKGQ
MEEQFWRSIIFHNHLDYLAKNGYEYEESIKNQAIKEQQELLMKMLALSCKLEREFRCVEL
AELMTQHAVNLAVKYASRSRKLILAQKLSELAVEKAAELAATQAEEEEEEEDFRKKLSAG
YSNTATEWDQPRLRNRTEDTDSRGQADDTEKPPELPEHGQNSKSADTFDVPAIKSGSVTS
SNQGRINPFKVSASSKEPAMSVTSTRSTNILDTMNKSSKKSTAFNRAANNEKSPVIKPLI
PKPKSKQASAASFFQKKPCQVDKTEEVKEETPKNAPSEAPVLCPQNVENQRPKTGFQMWL
EENRSNILSENPDFSEEADIIKEGMIRFRVLSAEERKAWTNKAKGETAIDEAEAKKRKHI
PDESRETENQKEAAKENQSVPKKQKLLALSANQKLSAFAFKQE
NT seq 3372 nt   +upstreamnt  +downstreamnt
atgccggccacactgaagccggtgaggtatggacatacagaaggacacacggacgtctgt
tttgatgattctgggagttgtattgtgacttgtggaagtgacggtgatgtgaggatttgg
gaagacttggatgatgatgatcctaaatccattaatgttggagaaaaggcatactcgtgt
gctttgaagaatggaaagttggtcactgcagtttccaacaataccgttcaagtccacaca
tttcctgaaggagctccagatggcatattgacccgcttcactacaaatgcaaaccatgtg
atctttaatggagatggtactaaaattgctgctggatcaagtgattttcttgtcaagatt
gtggatgtggtggattgtagccaacagaaaacatttcgaggacatgatgcccctgtttta
agtctttcttttgatcctaaggacatctttctggcatcagctagctgtgatggatctgtc
agagtgtggcatatctccaatcagacatgtgctattagttggccactactacaaaaatgc
aatgatgtggtaaatgcaaaatccatctgcagacttgcttggcagccacaaagtgggaag
ttactcgcaattcctgtggaaaaatctgtaaaattatatagaagagaaacatggagtaat
caattcgatctttcagatagtttcatctctcagacccttaatatagtaacctggtctcct
tgtggacaatatttagctgcaggtagcattaatggtttaattatagtttggaatgtggaa
accaaagtctgcatggaaagggtgaaacatgagaaaggttatgcgatttgtggtctggcc
tggcatcctacttgtggtcaaatatcttacacggatgcagagggaaaccttgggctcctg
gaaaacgtctgtgattctagtggaaagacttcaggaagtaaggtgtctagcagagtggaa
aaggattacaatgatctttttgatggagatgatacaagtaatcctggagactttctacat
gacagtgcagttgaggtcccctcttcttcaaaaggggttcttgatgatgatgatgatgac
ctcacgcttgcgtctagtcgttctagacatcgcggtcatatcctagaagatgacgaaaac
tcagtcgatgttacaatgctgaaaaacgagcttctcaaggaggaagaggatgatgatcag
gcaggcagtagtcataatctaccacttgtaacatcccaaaggccattttatgatgggccc
atgccaactccccgacaaaagcccttccagtcaggttctacacccctacatctcactcac
agattcatggtatggaattctattggaattattcgttgttataatgatgagcaagacaat
gccatagacgtagagttccatgatacctccatacaccatgcaacacacctatcaaacaca
ttgaattatacagtagcagatctttcccatgaagctattttgttggcgagtgaaagcact
gatgaactagcaagcaagcttcactgccttcacttcagctcttgggattcaagcaaagag
tggatggtagatatgcctcagcatgaggatattgaagccatttgtcttggtcagggatgg
gctgctgctgccactagtgccttgctccttcgattgttttctattggaggtgttcagaaa
gagatcttcagccttcctgggcctgtagtgtcaatggcaggacacggagaacagctttta
attgtttttcatagaggaacaggatttgatggagatcagtgccttggagttcagctgctg
gagctggggaaaatgaaaaaacaaattttgcttgggaaccctcttcctcttacaaggaaa
tcctacctagcatgggtggggttctcagctgaaggtactccctgttatgtggattctgaa
ggctgtgttcgaatgcttaacagagggcttggtaatacatggactcctatatgtaacaca
cgagaacactgtaagggaaaatctgaccactattgggtggtcggtatccatgaacatccc
cagcaactaaggtgcattccttgtaaaggttctcgatttcctcccacccttccacgccct
gctgtcgccatattatcctttagacttccttactgtcagattgcaacagagaaaggacaa
atggaggaacaattttggcgttcaattatatttcacaaccatcttgattacttagctaaa
aatgggtatgaatatgaagagagcattaaaaatcaagcaataaaagaacaacaggaactt
ttaatgaaaatgcttgcgctttcttgtaaactggagagagaatttcgttgtgtggaactt
gccgaattaatgactcaacatgctgtgaatttagctgttaaatatgcttctcgctctcgg
aagttaatattggcccaaaaacttagtgaactagctgtagaaaaggcagctgaactggca
gcaacacaagcagaggaggaagaggaggaagaggatttcagaaagaagctgagtgctggt
tacagtaatactgctacagagtgggatcagccaaggctcagaaaccgaacagaagatact
gacagcagaggacaggctgatgatacagaaaaaccaccagaactccctgagcatggacag
aactccaaaagtgcagatacatttgatgttccagctattaagtcaggttctgttacctct
agcaaccaaggacgaataaacccattcaaggtatcggccagttccaaagaaccagctatg
tcagtgacttcaacacggtcaactaacattttagatactatgaataaatcatctaaaaaa
tccactgcatttaatcgagcagcaaataatgaaaagtctccagttataaagcctctgatt
ccaaagccaaagtctaagcaggcatctgcagcatcttttttccagaaaaaaccttgtcag
gtcgataagactgaggaagtgaaggaagaaacccctaaaaatgccccatctgaagcccca
gtgttgtgtcctcaaaatgttgaaaaccaaaggccaaagactgggtttcagatgtggctg
gaagaaaatagaagcaacattttgtctgaaaatcctgacttttcggaggaagcagacata
ataaaagaaggaatgattcgatttagagtattgtcagctgaagaaaggaaggcatggact
aacaaggccaagggagagactgcgatagatgaagctgaagcaaagaagcgaaaacatatt
cctgatgaaagccgtgaaacagaaaaccagaaagaagcagcaaaggagaatcagagcgtg
cctaaaaagcaaaaacttttagctctttctgctaatcagaaactatcagcttttgcattt
aaacaggagtaa

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