Perognathus longimembris pacificus (Pacific pocket mouse): 125363718
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Entry
125363718 CDS
T08928
Symbol
Nfx1
Name
(RefSeq) transcriptional repressor NF-X1 isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
125363718 (Nfx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125363718 (Nfx1)
04121 Ubiquitin system [BR:
plop04121
]
125363718 (Nfx1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
125363718 (Nfx1)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
125363718 (Nfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
Motif
Other DBs
NCBI-GeneID:
125363718
NCBI-ProteinID:
XP_048218965
LinkDB
All DBs
Position
1:129086699..129144153
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AA seq
1118 aa
AA seq
DB search
MAEAPPVSGTFKFNTDAAEFIPQERKNSGLSYGTQRRLDSNRIGRRNHSSSPPCHLSRQV
PYDDISAVHQHNYPSGSKPKSQQVFFHSSLNKSLKNHGLQNQPWQKSRNEKHHMKVKKAQ
GLADQYSDTASLESVARSESGTNPREHSPSENEKEVVSADPRGAKPKKAAQFVYGYGRGP
KVKGKLKCEWGHRVTPKPEDAGPENTKPVGVSHSDSSDISSRKGVLDGYGAKRNEQRRYP
QKRPPWEVEGARPRPGRNPPKQEGQRHTNAGSKHMTPIPKDNLNERPTQSACDSGNLAVI
NKSSRRVDQEKNVIKRQDPKVVSPFPRGKQNLVLKNVETHTGSLVEQLTAEKYECMVCCE
LVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNIYTCFC
GKVKNPEWSRNEIPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCECGRTR
HTVRCGQAVSVHCSNPCENILNCGQHHCAELCHAGQCQPCRIILNQVCYCGSTSRDVLCG
TDIGKSDGFGDFGCLKICGKDLKCGSHTCSQVCHPQPCQPCPRLPHLVRCCPCGQTPLSQ
LLELGSSGRKTCMDPVPSCGKVCGKPLPCGSSDFIHTCEKLCHEGDCGPCSRTSVISCRC
SFRTKELPCTSLKSEADATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCG
LHRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARIHECDHPV
YHSCHSEEKCPPCTFLTQKWCMGKHELRSNIPCHLVDISCGLPCNATLPCGMHKCQRLCH
KGECLVDETCKQSCTTPRANCGHPCMASCHPSLPCPVTACKSKVELQCECGRRKEMMICS
EASSTYQRIAAISMASKITDMQLGDSVEISKLITKKEVQQARLECDEECSALERKKRLAE
AFDISDDSDPFNVRSSGSKFSDSLKDDARKDLKFVSDVEKEMETLVEAVNKGKNSKKSHC
FPPMNRDHRRIIHDLAQVYGLESVSYDSEPKRNVVVTAIRGKSICPPTTLTGLVEREMQT
RPPPPIPHHRHQADKNSGSSNLQKIVKEPVIDYFDVQD
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgcctccagtctcaggtacttttaaattcaatacagatgctgctgagttc
attcctcaggagagaaaaaattctggtctaagttatgggactcaaagacgactagactct
aataggattggcagaagaaatcatagttcatcacctccctgtcatctctccaggcaagtc
ccttatgatgacatctctgctgttcatcagcacaattatccttctggaagcaaacctaag
agtcagcaggtgtttttccattcttctttaaataaatcactcaagaatcatggtcttcag
aatcaaccttggcaaaaatcgaggaatgaaaagcaccatatgaaagtcaagaaagcacag
gggcttgctgatcagtactcagacacagctagcttagaaagtgtggccagatctgagagt
gggacaaaccccagagagcatagcccctctgaaaatgaaaaggaagttgtcagcgcagat
cccaggggagcaaagcccaaaaaagcagcacaatttgtgtacggctatggtagaggacca
aaagtcaaggggaaactcaaatgtgagtggggtcatagagtgactccaaaacctgaggat
gctggacctgaaaatacaaaacctgtgggagtttctcattctgactcttcagatatatcc
agtagaaagggagtattggatgggtatggggccaaacgaaatgagcagagaagatacccc
cagaagaggcctccttgggaagtagagggggccaggccaagaccaggcaggaatccacca
aaacaggagggtcaacgacatacaaatgcaggatccaaacacatgactcccattccaaag
gataatcttaatgaaagaccaacacaatctgcctgtgacagtgggaatttggcagtcatc
aataagtcttccagaagggttgaccaagagaaaaatgttataaagagacaagatcctaaa
gtggtatctccttttcctcggggcaaacagaaccttgtgctcaagaatgtggaaacacat
acaggttctctagtcgaacaactaaccgcagaaaaatatgagtgcatggtgtgctgcgaa
ttggttcgagtcacagccccagtgtggagttgtcagagctgttatcatgtgtttcatctg
aattgcataaagaaatgggcaagatctccagcgtctcaagcagatggccagagtggttgg
cggtgccctgcctgtcagaatgtttctgcacatgtccctaatatctacacttgtttctgt
ggcaaggtaaagaatcctgaatggagcagaaatgaaattccgcatagttgtggtgaggtt
tgtagaaagaagcagcctggccaggattgcccacattcctgtaaccttctctgccatcct
ggaccatgcccaccctgccctgcatttatgactaagacatgtgaatgtggacggaccagg
catacagttcgatgtggccaggctgtctcagtccactgttctaacccatgtgagaatatt
ttgaactgtggtcaacaccactgtgcagagctgtgccatgcaggtcaatgtcagccttgc
cggatcatattgaaccaggtatgctactgtggcagcacctcccgagatgtattatgtgga
acagacataggaaaatctgatggatttggagactttggctgtttaaagatatgtggcaag
gacttgaaatgtgggagtcatacctgttctcaagtgtgtcaccctcagccctgtcagcct
tgcccacggcttccccatctggtgcgttgctgcccttgtggccagactcctctcagccag
ttgctagaacttggaagcagtggtcggaaaacgtgcatggatcctgttccttcatgtgga
aaagtgtgtggcaagcctctaccttgtggttcctcagatttcattcatacctgtgaaaag
ctctgccatgaaggagactgtggaccatgctctcgcacatcggttatttcctgcagatgc
tctttcagaacaaaggagcttccatgtaccagtctcaaaagtgaagcagatgctacattt
atgtgtgacaagcggtgtaacaagaagcggttatgtggacggcataaatgtaacgagata
tgctgtgtggataaagagcacaagtgtcctttgatttgtgggaggaaactccgttgtggc
cttcataggtgtgaagaaccttgtcatcgagggaactgccagacatgttggcaagccagt
tttgatgagttaacttgccactgtggtgcatcagttatctatcctccagttccctgtgga
actaggccccctgagtgtacccagacctgtgccagaattcatgaatgtgaccatccagtg
tatcactcttgtcatagtgaggaaaagtgtcccccttgtactttcctgactcagaagtgg
tgcatgggcaaacatgagttacgaagcaatatcccttgtcacctggttgatatctcttgt
ggattaccctgcaacgccacactaccatgtgggatgcacaagtgtcagagactttgtcac
aaaggagaatgtcttgtggatgagacctgtaagcaatcctgcaccacccccagagctaac
tgtggccacccatgtatggcatcctgccaccccagcttaccctgccctgtgaccgcttgt
aaatccaaggtagagctacagtgtgaatgtggacgaagaaaagagatgatgatttgctct
gaagcatcaagtacttatcaaagaatagctgctatctctatggcctctaaaataacagac
atgcagcttggagattcagtggagatcagcaagttaattaccaagaaggaagtgcaacag
gccaggctagaatgcgatgaggaatgctcggccttggaaaggaaaaagagattggcagag
gcatttgatatcagtgatgattctgatcctttcaatgtacgatcttcaggctcaaaattt
agtgatagtttgaaagatgatgccaggaaggacttaaagtttgtcagtgacgttgagaag
gaaatggaaacccttgtggaggctgtgaataagggaaagaacagtaagaaaagccactgc
ttccctcccatgaacagagatcaccgccggatcatccatgacctggcccaagtttatggc
ctggagagtgtgagctatgacagtgaaccaaagcgcaacgtcgtggtcactgccatcaga
gggaagtctatttgtcctcccaccacgctgacaggtttggttgaaagggagatgcagaca
cggcctccaccaccaattcctcatcacagacatcaggcagacaagaattctgggagcagt
aatttacagaagatagtcaaggagccagtaattgactactttgatgtccaggactaa
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