Perognathus longimembris pacificus (Pacific pocket mouse): 125363899
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Entry
125363899 CDS
T08928
Symbol
Dsc1
Name
(RefSeq) desmocollin-1 isoform X1
KO
K07600
desmocollin 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125363899 (Dsc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125363899 (Dsc1)
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Major cadherins
125363899 (Dsc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_pro
CADH_Y-type_LIR
Fibulin_C
DUF8092
Motif
Other DBs
NCBI-GeneID:
125363899
NCBI-ProteinID:
XP_048219188
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All DBs
Position
15:complement(26548374..26579550)
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AA seq
886 aa
AA seq
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MAVAYAAPGSIFCKQLLFYLLVLILLCNACPKISLQVPSHLQAETLIGKVNLEECLKSAS
LILSSDPAFRILEDGSIYTTRDLLLSSESKSFSILLSDSQYQQQKEMEIVLSSRERKSPK
KRHAKESALKRSKRRWAPIPCSLMENSLGPFPQHVQQIQSDAAQNYTIFYSISGPGVDKE
PLNLFYIEKDTGDIYCTRSIDREQYDQFMVYGYATTVDGYAPDYPLLLLFKVEDDNDNAP
YFETKVTVFSVPENCRTGTSVAQVTAIDNDEPGTLHTRLKFKILQQIPDQPKHFSIHPDT
GVITTTTPLLDREMCDTYKLVMEVRDMGGQPFGLFTTGTITISLEDENDNSPYFTETSYS
TEVEENRIDVEILRMNVHDKDLPNTPHSKAVYKILQGNENENFKITTDPNTNEGVLCVVK
PLNYEVSRQIVLQIGVLNEAQFSKAANSQTPTMCTTTVTVNVKDSDEGPECEPPVKIIQS
KDGLPAGQELLGYKALDPDTRNGDGLRYQKLGDEDNWFEINEQTGNLKTVKIVDRESKFV
KNNQYNVSVVATDRVGRSCTGTLVVRIEDTNDHPPQIEKEVTICQHDKDYVVLEPVDPDG
PDNGPPFQFLLDNSASKLWTLEPQDGKRAILRQKQYMNYNYYSVPIQIQDRHGASAKHML
SVRVCDCTAPTECRMSVRDAKPTNVILGRWAIAAMVLGSALLLCILFTCFCITVKKTVKK
KCFPEDVAQQNLIVSNTEGPGEEVMEANIRIPTQTSNICDTSMSVGTLGGQGVKTQQSFE
MVKGGGHHTLESSKGAGQGVVETGRYAYTDWQSFTQPRLGEKVYRCAQDEEHKHSEDYVR
SYNYEGKGSMASSVGCCSDRQEEEGLEFLDHLEPKFRTLAKTCVKK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcctacgctgccccagggagcatcttctgtaagcagctccttttctatcta
ctggttctgatattactttgcaatgcttgtccaaaaatttctctccaagttccttcacat
cttcaggctgaaacacttataggcaaagtgaatctggaggagtgtcttaagtcagccagc
ctaatcctgtctagtgaccctgccttcagaattcttgaagatggctccatttataccacg
cgtgacctgcttttgtcttctgaaagcaagagtttttccattttactctcagacagtcag
taccagcaacaaaaagaaatggaaattgtgttgtcatcaagggaaagaaagtctccaaag
aaaagacatgccaaagagtcagctctcaagcgcagtaagagaagatgggctcctattcca
tgttcactgatggagaactcactaggtccatttccacaacacgttcagcagatccaatct
gatgctgcacagaattacaccattttttactccataagtggaccaggggtggacaaagaa
cctttgaatttgttctacatagagaaagacacaggtgatatctattgtacacgaagcatt
gaccgtgagcagtatgatcagtttatggtctatggctatgcaaccactgttgatggctat
gctccggattaccctcttctcttgttgttcaaagttgaagatgacaatgataatgcccct
tattttgaaactaaagtgacggtgtttagtgttcctgaaaactgccgaactggaacctcc
gtggcacaagtgacagccattgacaatgatgaacccggaactctacatacgcgtctgaaa
tttaaaatcctacagcaaatcccggatcagccaaagcatttctccatacatccagataca
ggcgtgatcactaccaccactcctctactggacagagagatgtgtgatacttacaagtta
gtgatggaagtgcgggacatgggggggcagccttttggtttattcactacaggaacaatc
acgatttcacttgaggatgaaaatgacaactcaccatatttcacagaaacttcttattct
acagaagtagaagaaaacagaattgatgttgagattttacgaatgaatgtgcacgacaaa
gatttgccaaacactcctcactcgaaggctgtctacaaaattctacagggaaatgaaaat
gagaacttcaaaattaccacagatccaaatacaaatgaaggagttttatgtgttgtcaag
ccattgaactatgaagtcagtcgccaaattgttttgcaaattggtgtacttaatgaagca
cagttctctaaagcagcaaactcgcagactcccacaatgtgtaccacaactgtaacagtt
aatgtgaaagacagtgatgaaggccctgaatgtgagcccccagtaaaaattatccaaagc
aaagatggccttccagctggccaagaactccttggatacaaagcactggacccagacacc
cgcaatggtgacggtttaaggtatcagaagttaggagatgaggataactggtttgaaatc
aatgagcaaactggaaacttgaaaactgtgaaaatagtagatcgagaatcaaaatttgtg
aaaaacaaccagtacaacgtttcagtagtggctacagatagagttggcagatcttgcact
ggaacgttagtggttcgtatagaagacactaatgatcacccaccgcaaattgaaaaagaa
gtgaccatttgtcagcatgacaaggactatgttgttctggaacctgtagacccagatggg
cctgacaatggtccaccttttcaattccttctggataattctgcctccaaactgtggact
ttagaaccacaggatggtaaacgtgccattctgcgtcaaaaacaatacatgaattataac
tattattctgtgcctatccaaatacaagatagacatggtgcttctgcaaaacatatgttg
tcagtgcgagtatgtgactgcacagcaccaactgagtgtagaatgagtgtgagggatgca
aaaccaaccaatgtgatacttggcaggtgggctattgctgccatggtgctgggttctgca
ttgttattatgcattctgtttacatgtttttgcataactgttaagaaaacagtaaagaag
aaatgtttcccagaggatgtagcccagcaaaatttaattgtatcaaatacggaaggacct
ggagaagaagtgatggaagcaaatattaggatccccacacagacatccaacatttgtgac
acaagtatgtctgttggcacgctgggtggccagggagtcaaaacacagcaaagttttgag
atggtcaaaggaggcggccatcacaccttagagtccagcaaaggagcaggacaaggggtt
gtagaaactggcagatatgcatacacggactggcagagtttcacccaacctcgacttggc
gaaaaggtgtaccggtgtgcacaagatgaggaacacaaacactctgaagactatgtccgt
tcatataactatgagggaaagggctccatggccagctctgtaggctgctgcagtgatcgg
caagaagaagaagggctagagtttctagatcatctggaacccaaatttaggacactagca
aagacctgtgtaaagaaataa
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