Perognathus longimembris pacificus (Pacific pocket mouse): 125363901
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Entry
125363901 CDS
T08928
Symbol
Rnf165
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125363901 (Rnf165)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125363901 (Rnf165)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125363901 (Rnf165)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
zf-RING_Vps41
zf-RING_4
Prok-RING_4
DUF7856
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
125363901
NCBI-ProteinID:
XP_048219194
LinkDB
All DBs
Position
15:38871428..38962675
Genome browser
AA seq
347 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGAPFQRSQHPHATSCRHFHLGPPQPQQLTPDFPLAHPVQS
QPGLSAHMAPAHQHSSTLHQSLTPLPTLQFQDVTGPSFLPQALHQQYLLQQQLLEAQHRR
LVAHPRRSQERVSVHPHRLHPSFDFGHQLQTPQPRYLAEGTDWDLSVDAGLSPAQFQVRP
IPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESY
EELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLS
MLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQLGADS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggtcctggtccacgtcggctatctcgtgcttccagtgtttggctctgtgcgaaacaga
ggtgccccctttcaaaggtctcagcatcctcacgctacctcctgccgccacttccacctg
ggccccccgcagccgcaacagctcaccccagatttcccgctggcccaccccgtgcagtcg
cagccgggcctcagcgcccacatggccccggcccaccagcacagcagcacactgcaccag
tcgctgaccccactgcccaccctgcagttccaggacgtcacaggtccctctttcctacct
caggccctgcaccagcaatacctcctgcagcagcagctcctggaagcccagcaccgcagg
ctcgttgcgcaccccaggcggagtcaggagcgtgtgtccgtccacccccaccgcctccac
cccagcttcgactttggccaccaactgcagacacctcagccccggtatctggctgagggc
actgactgggacctcagtgtggacgcaggcctgagtcccgctcagttccaagtgcggccc
atccctcagcattatcagcattacctagcaactcctcgaatgcaccacttccccagaaac
tcctcctccacgcagatggttgtccatgaaatccgaaactacccttatccccagcttcac
ttccttgcactccaggggctaaatcccagtagacacacctctgctgtgagagagagttac
gaggagctgctgcagcttgaggacaggttgggaaatgtgactcgaggagctgtgcagaac
accatcgagaggtttaccttcccccacaagtacaagaagcgaagaccccaggatggcaag
ggcaagaaggatgagggagaggagtcagacacagatgagaaatgcacaatttgcctatct
atgctggaggatggagaagatgtgaggcgcttaccctgtatgcatctcttccaccaactg
tgtgtggaccagtggctcgcgatgagcaagaaatgccccatctgccgagtggacattgag
acacaactgggagccgacagctga
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integrated database retrieval system
