Perognathus longimembris pacificus (Pacific pocket mouse): 125363923
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Entry
125363923 CDS
T08928
Symbol
Dsg4
Name
(RefSeq) LOW QUALITY PROTEIN: desmoglein-4
KO
K07599
desmoglein 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125363923 (Dsg4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125363923 (Dsg4)
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Major cadherins
125363923 (Dsg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
125363923
NCBI-ProteinID:
XP_048219218
LinkDB
All DBs
Position
15:26735995..26763402
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AA seq
1050 aa
AA seq
DB search
MTATEVLIQVSGKKEQKCMLILCLPXQVVMEVNSEFIVEVKELDIENGTMKWQTVRRQKR
EWIKFAAACREGEDNSKRNPIARIRSDCEVNQKITYRISGAGIDRPPYGVFTINPRTGEI
NITSVVDREITPLFLIYCQALNARGEDLESPLELRVKVMDVNDNPPVFTQNVYTANIEEN
SEANALVVKLSATDADEDNHLNSKIAYKIIAQEPTGSPMFMVNRYTGEVRTMSSFLDREQ
HSMYNLLVRGSDRDGATDGLSAECDCRIRVLDVNDNFPILEKTSYSASIEENCLSSELIR
LQAIDLDEEGTDNWLAKYLILSGNDGNWFDIQTDPRTNEGILKVVKMLDYEEMPNIHLSI
GVKNQAEFHHSVASQFRMHSTPVRIQIVNVREGPTFRPNSMTFSVREGVRGDSLLNYVLG
TYTAIDLDTGNPATNVRYIIGHDAGSWLKVDSRTGEIQFSREFDKKSKYITNGMYTAEIL
AIDDGSGKTATGTICIEVPDASDYCPVIYSERTICTDSPAVLIYVSDHSFGAPFTFCVVD
QPPEVANMWDIQSINGTSAILMAQQPLSPGVYQIPIIVKDSYNRACELPQIVQLIACECD
NSVCLHSSTTGIYTGDVSVVTDNSYGSTTDDGAGESNVRLGPSGIGMIVLGLLLLLLSPL
LLLMCCCKRRQPEGLGTRFAPVPEGGEGVMQPWRIEGAHPEDRDVLNVCPPMTASNTQDR
IDSSEIYTNTYAGGGTVEGGVSGVELNTGVGAAAGLVTGAAASGTLRKRSSTIGTLREYQ
DTTGLNMAFLDSYFSEKAYAYADEDEGRPANDCLLIYDHEGVGSPVGSIGCCSWIVDDLD
ESYMETLDPKFRTLAEICLDTEIEPFPSQQACIPISTDLPLLGPNYFVNESSGMTLSEAE
FQAEMATCEPMIHGDIIVTETYTTTEPCVQPTTIVFDPQLPTNVVVTETVMAPVYDVQGN
ICVPAEIANTHNVYYAERVMSSPGLPDMSNASMADGCMGPVMSGGILVGPEIQVTQMCPD
IHISQTIGSSSPITSRHRVTRYSNIHYSPQ
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgacagctactgaggtcctgatacaagtgtcaggaaagaaggaacaaaaatgtatgcta
atattgtgtcttccataacaggtggtgatggaagtaaacagtgaatttattgttgaggtg
aaagaattagacattgaaaatggcaccatgaagtggcaaacagtcaggaggcaaaagcga
gaatggatcaagtttgctgcggcctgtcgagaaggagaggacaactccaagaggaatcca
attgcccgaattcgctcagactgtgaagtgaatcaaaagatcacataccgaatctctgga
gcaggaattgatcgaccaccttatggtgtattcaccattaatcctcggactggcgaaatt
aatatcacttcagtggtggacagagagataactccacttttcttgatctattgtcaggct
ctgaatgcacggggtgaagatttagagagccctcttgagctcagagtcaaagttatggat
gtaaatgataaccccccagtgtttacacaaaacgtgtacacagcgaacattgaagaaaac
agcgaggccaatgcactggtagtaaagctgagcgctacagatgcagatgaagacaatcac
ctgaattctaaaattgcctacaagatcattgctcaggagcctacaggttcacctatgttc
atggtgaacaggtacactggagaagttcgcacgatgtccagttttcttgacagagagcaa
cacagcatgtacaaccttctcgtgaggggctccgatcgggatggggccacagatgggcta
tctgctgaatgtgactgcagaatcagggttctcgatgtcaatgataatttccctatccta
gaaaaaacttcatactcagcaagcatcgaagagaattgtctgagctcagaactgataaga
ttacaagcgattgatcttgatgaagaaggcactgataattggctggcaaaatacttaatt
ctttctggaaatgatgggaattggtttgatatccaaacagacccacgaaccaacgaaggc
attctgaaagttgtgaagatgctggattatgaagagatgcctaatattcatctcagtatt
ggagttaaaaatcaagctgagtttcatcactcagttgcttctcaattccgaatgcactcc
acccctgtgagaattcagattgttaatgtgagagaagggccaacatttcgtccaaattcc
atgacttttagtgtacgagaaggagtaagaggagattccttattgaattatgtgcttggc
acatacacagccatagatctggacacagggaatcctgcaacaaacgtcaggtatattata
gggcatgatgcaggcagctggttaaaagtcgattcaagaactggtgagatacagttttct
agggaatttgataagaagtcaaaatatatcaccaatggaatgtatacagcagagatcctg
gctatagatgatggctctgggaaaacagctacaggaaccatctgtattgaggttccagat
gccagtgattactgtccagtcatttattctgaaagaaccatctgcactgattctccagca
gtccttatctatgttagtgaccattcttttggagcccctttcaccttctgcgttgttgac
caaccaccagaggtagctaacatgtgggatatccagtcaataaatggaacatctgccatc
cttatggctcagcaacctttatctccaggagtttaccaaattccaatcatagtcaaggat
agctataacagagcatgcgaactgccacaaattgtgcagttgattgcctgtgagtgtgac
aacagtgtgtgcttacactccagtaccacaggcatctacactggggatgtgagtgtggtc
actgacaacagctatgggtctaccactgatgatggagctggagaatccaatgtaagactt
ggaccctcggggataggcatgattgtgctgggcctcttactactactcttgtcacctctc
ttgctcctcatgtgttgctgcaaacgaagacagccagaaggcctggggacaaggtttgcc
cctgtgcccgagggtggagaaggggtaatgcaaccctggagaatagaaggggcccatcca
gaagacagagacgtgctgaacgtatgtccacccatgacagcttctaatacccaggatcgt
attgattcctctgaaatctacaccaacacctatgcgggaggaggcacggtggaagggggt
gtgtccggagtggaactcaacaccggagttggagcagccgcaggcctggtgacaggagct
gctgcctctggaaccttgaggaagaggagttccaccataggcacactgcgggaataccaa
gacaccaccggcctcaacatggccttcctggacagctacttctcagagaaagcatatgca
tatgcagatgaagatgaaggccgaccagccaacgactgcctgctcatttatgaccatgag
ggagtaggatctcctgtgggctccattggctgctgcagttggattgtggatgacttagat
gaaagctacatggaaactttagatccaaaatttaggactcttgctgagatctgcttagac
acagaaattgagccatttccctcacagcaggcctgtatacctattagtactgacctgcct
ttgctgggacctaattactttgtcaatgagtcttccggaatgactctctctgaggctgaa
ttccaagcagaaatggcaacatgtgaacccatgattcatggggatatcatagtgactgag
acttacactaccaccgaaccgtgtgtacaacctactacaattgtatttgatcctcagctt
cccaccaatgttgttgtaactgaaacagtaatggcacctgtctatgatgtacaaggtaat
atttgtgtgcctgctgagatagccaatactcacaatgtatactatgctgaaagagtgatg
tccagccctggtcttcctgacatgagcaatgctagcatggctgatggttgtatgggacct
gtgatgagtggtggtatattagtagggccagaaattcaagtgacacaaatgtgtccagat
attcacataagccaaactattggctcttcatctccaataacatctcgacatagagtaaca
cgatatagtaatatacattactccccacagtaa
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integrated database retrieval system
