Perognathus longimembris pacificus (Pacific pocket mouse): 125363977
Help
Entry
125363977 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: teashirt homolog 3-like
KO
K09236
teashirt
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125363977
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125363977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_2
zf-C2H2_6
Zap1_zf1
zf-met
DUF7086
Zf-C2H2_ZNF451
zf-C2H2_jaz
zf-C2HC_2
DUF7410
zf-C2H2_3rep
Motif
Other DBs
NCBI-GeneID:
125363977
NCBI-ProteinID:
XP_048219285
LinkDB
All DBs
Position
15:544867..548533
Genome browser
AA seq
1074 aa
AA seq
DB search
MPRRKRQAPRCSAAYVSNELKAAALVDEDVDREDHTADGEPSPKYMCLEKKLSQTCPSYK
NSPAAEFSSHEMDSESHIREASDQMEDCENSSIKIEEETKDVSVPLEDTTTLLDSLEQMK
AVYNNFLSNSYWSNLNLNLHQPSSEKNTGENSSSSFDWHQSATAKTLQQVSQSRMLPEPS
LFSTVQLYRQSSKLYGSIFTGASKFRCKDCSAAYNTLMELTVHMNETGHYRDDNHXTDSN
NPKRWSKPHKCSLLEMGGKEDAQKVLKCMYCGHSFESLQDLSVHMTKTKHYQNVPLKEPV
TPVATKIIPTMRKKASLELKLPSSPDSTGGTPKATISDTTDTLQKNANPYIMPNNRYSHQ
NGASYTWDFEARKSHILKCMECGSSHDTLQELTAHMMVIGHFIKVTNSAMKKGKPIMEMP
VTPTVTTLLDEKVQSVPLGAATFTSPSNTPASVSPKLNLDIKKEVEKDKAGSEEKPKDKE
KPGEEEEKYDISSKYHYLTENDLEESPKGGLDILKSLENTVMSAINKAQNGTPSWGGYPS
IHAAYQLPNMMKLSLGSSGKNTALKPLFGNNEIVSPTKSQALISPPSSQTSPMPKTNFHA
MEELVKKVTEKVAKVEEKMKEPEGKLVPPKRATPSPWGSELSDPVKMEAAHGAGLKSQEG
SPSSPPRDGCKEGSPKAEPVENGKELAKPLSTGLSGSTAIITEHPQEQPFVNPLSALQSV
MNVHLGKAAKPSLTTLDPMSMLFKMSNSLAEKAAMATPPPPLPLSKKADHPDRYFYHFNN
DQPIDLTKGKREKGYSGGSGLLSPTSTSPATSSSLVTTAKTSISFMSNSPLRENALSDIS
DMLKNLTESHTSKSSTPSSISEKSDLDGTALEEAEEATPAQKRKGRQSNWNPQHLLILQA
QFAASLRQTSEGKFIMSDLSPQECTHISCFTGLPMTTISHWLANVKYQLRRTGGTKFLKN
LDTSHPVFFCNDCASQIRTPSMYISHLESHLGFRLRDLSKLSTEQINNQIAQTKSPSSDK
LVSSSPEEDLGTSYQCKLCNRTFASKHAVKLHLSKTHGKSPEDHLLYVSELEKQ
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaggaagcggcaggcgccccggtgctcagcagcctatgtttccaatgaatta
aaagcagccgccttggtagatgaagatgtagacagagaagaccacacagcagatggagaa
ccctctcccaagtacatgtgtctggagaagaagctcagccagacgtgccccagttacaag
aattcaccagctgctgagttttccagccacgaaatggacagcgaatcccacatcagagag
gccagtgaccaaatggaggactgtgaaaacagctccatcaaaatcgaagaagagacgaaa
gatgtctccgtgcccttggaagacaccaccaccctcttagacagcctggagcagatgaag
gctgtgtacaacaacttcctatccaactcctattggtccaacctcaatctcaacctccac
cagccgtcctcggagaagaacacgggtgagaacagcagcagcagctttgattggcaccag
agtgccacggcgaagaccctacagcaggtgtcacagagccgcatgttgcccgagcccagc
ctcttcagcaccgtgcagctgtaccggcagagcagcaaactctatggctccatattcacg
ggggccagcaagttccgctgcaaggactgcagcgcggcctacaacaccctgatggagctg
acggtgcacatgaacgagacgggccactaccgtgatgataaccactagacggacagtaat
aaccccaaacgctggtccaagccacacaagtgctctttgctggagatgggagggaaagag
gatgcgcagaaagtcctcaagtgcatgtactgtgggcactccttcgagtccttgcaggat
ctgagcgtgcacatgaccaaaacaaagcactaccagaacgtgcctctgaaggaaccggtc
acgcccgtggccacgaaaatcatccccaccatgcggaaaaaggcatcgctggaactaaag
ctccccagctcccccgattccacaggggggacccccaaagccaccatctcggataccact
gatacactccagaagaacgccaacccgtacatcatgccaaataaccggtacagccaccag
aacggggccagttacacctgggatttcgaagcccgcaagtcccatatcctcaagtgtatg
gagtgcggcagttcccatgatacactgcaggagctcacagcccacatgatggtcatcggc
cacttcatcaaggtcaccaactccgccatgaagaaggggaagccaatcatggagatgcct
gtcacccccaccgtcaccaccctgctggacgaaaaggtccagtcggtgcccctgggagcc
gcgaccttcacctccccctccaacacacctgcaagcgtctccccaaaactgaacttagac
atcaagaaggaagtggagaaagacaaagccggctcagaagagaagccgaaagacaaggag
aagcccggtgaggaagaggagaagtatgatatttcctccaagtatcattatttgaccgag
aatgacttggaggagagccccaaggggggcttggacatcctcaaatctttagaaaacaca
gtgatgtctgccatcaacaaggcccagaatggcacaccgagttgggggggttaccccagc
atccatgctgcctaccagcttcccaacatgatgaagttgtctctgggctcctctgggaag
aacacggccttgaaacccttgtttggcaacaatgagattgtgtctcccacaaaaagccag
gccctgatctcaccacccagtagccagacatctcctatgcccaaaaccaatttccacgcc
atggaagaactggtaaagaaagtcaccgagaaagttgccaaagtggaggagaaaatgaag
gagcccgaaggcaaactggtcccacccaagagggccaccccttctccctggggcagtgaa
ctgagcgaccctgtcaagatggaagcggcccacggggcaggccttaaaagccaagagggg
agccccagcagcccccctcgggatggctgcaaggaggggagccccaaggcagagccggtg
gagaatggcaaagagctggccaagcctctgagcactggcctgagtggcagcacggccatc
atcaccgagcacccccaggagcagccttttgtgaatcctctgagcgccctgcagtccgta
atgaatgtgcacttgggcaaggctgccaagccctccctgaccaccttggaccccatgagt
atgcttttcaagatgagcaacagtctggctgagaaggcggccatggctaccccaccacca
cccctgcccctctccaaaaaggcagaccacccggaccgttacttttaccacttcaacaat
gatcagccaatcgatctgacgaaaggaaagcgtgagaaaggctattctgggggttcaggg
cttttatcccctacatccacttcccccgccacctcctcatctctggtgacaacggccaag
acatccatctccttcatgtcaaactcgccgctgcgcgagaacgccttgtcagacatctct
gacatgctgaagaacttgacagagagccacacgtccaagtcctccacgccttccagcatc
tccgagaagtctgacctcgacgggacggccctggaggaggccgaggaggccacgcccgcg
cagaagaggaaaggccggcagtccaactggaacccccagcacctgctgatcttgcaggcc
cagtttgccgccagcctgaggcagacatcggagggcaagttcatcatgtctgacctgagc
cctcaggagtgcacgcacatctcttgcttcacggggctccccatgaccaccatcagccac
tggctggccaacgtcaagtaccagcttcgaaggacaggtgggaccaagtttctgaaaaac
ttggacacgagtcaccctgtgtttttttgtaacgactgtgcatcccagatcaggactcca
tccatgtacattagccacttggagtcacatttaggtttccggttacgagacttatcgaaa
ttgtccacggaacagattaataaccagatagcacaaaccaagtcaccgtcatcagacaaa
ctggtgagctcctccccagaggaagacttagggacctcgtatcagtgtaagctttgcaat
cggaccttcgccagcaagcacgccgtgaagctgcaccttagcaaaacacacgggaagtcg
cccgaggaccaccttctgtatgtgtctgagctggagaagcagtag
DBGET
integrated database retrieval system
