Perognathus longimembris pacificus (Pacific pocket mouse): 125364016
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Entry
125364016 CDS
T08928
Symbol
Cxxc1
Name
(RefSeq) CXXC-type zinc finger protein 1 isoform X1
KO
K14960
COMPASS component SPP1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125364016 (Cxxc1)
03036 Chromosome and associated proteins [BR:
plop03036
]
125364016 (Cxxc1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
125364016 (Cxxc1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
125364016 (Cxxc1)
COMPASS/SET1 complex (yeast)
125364016 (Cxxc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
125364016
NCBI-ProteinID:
XP_048219373
LinkDB
All DBs
Position
15:complement(41546625..41551524)
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AA seq
654 aa
AA seq
DB search
MEGDGSDPEPPDAGEDSKSENGENAPIYCICRKPDINCFMIGCDNCNEWFHGDCIRITEK
MAKAIREWYCRDCREKDPKLEIRYRHKKSRERDGSERDSSEPRDEGGGRKRPVPDPDLQR
RAGSGTGVGAMLARGSASPHKSSPQPLVATSSQHHQQQQQIKRSARMCGECEACRRTEDC
GHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPTSLSPVTPSESLPRPRRPPPT
QQQPQPSQKLGRIREDEGTVVSVVKEPPEATVTPEPLSDEELPLDPDLYQDFCAGAFDDH
GLPWMSDTEESPFLDPALRKRAVKVKHVKRREKKSEKKKEERYKRHRQKQKHKDKWKHPE
RADAKDPASLPQCLGPGCVRAAQPGSKYCSDDCGMKLAANRIYEILPQRIQQWQQSPCIA
EEHGKKLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEESNENDSDDTDL
QIFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYC
KRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRLPKRQCNRHYCWEKLRRAEVD
LERVRVWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLRSSADR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacggctcggacccggagccgcccgacgcgggggaggacagcaagtcggag
aacggagagaacgctcccatctactgcatctgccgcaagcccgacatcaactgcttcatg
atcggctgtgacaactgcaacgagtggttccatggggactgcatccggatcacggagaag
atggccaaggccatccgtgagtggtactgccgggactgccgagagaaagacccgaagctg
gagattcgctatcggcacaaaaagtccagagagcgggatggcagtgaaagggacagcagt
gagcctcgggatgagggtggagggcgcaagagacctgttccagacccggacctgcagcgc
cgcgcagggtcagggacaggggttggggccatgctcgctcggggctctgcatcgccccac
aaatcctctccacagcccttggtggccacatctagtcagcatcaccagcagcagcagcag
atcaaacggtcagcccgaatgtgtggtgagtgtgaggcatgccggcgtacagaagactgc
ggtcactgtgacttctgccgtgacatgaagaaatttgggggccccaataaaatccgccag
aagtgccggctacgccaatgccagctgcgggcccgggaatcatacaagtacttcccaact
tcgctctctcctgtgacaccctcagagtccctaccaaggccccgccggccaccgcccact
caacagcaaccacagccatcccagaagttgggccgtatccgggaagatgaggggacagta
gtatcagtagtcaaggagccacctgaggctacagtcacacctgagccactctcagatgag
gagctaccactagaccctgacctgtaccaggacttttgtgcaggagcctttgatgaccat
ggcctgccctggatgagtgacacagaagagtccccattcctggaccctgcactgcgcaag
agggcagtgaaagtgaagcatgtgaaacgccgggagaagaagtctgagaagaagaaggag
gagagatataaacggcatcgacagaagcagaaacacaaggacaaatggaaacacccagag
agagctgatgccaaggaccctgcatctctgccacagtgcctggggcctggctgtgtgcga
gctgcccagcctggctccaagtattgctcagatgattgtggcatgaagctggcagccaac
cgtatctatgagatcctcccccagcgcatccagcaatggcagcagagcccttgcattgct
gaagaacatggcaagaagctgctagaacgcattcgccgtgaacagcagagtgctcgcaca
cgtctccaggaaatggaacgcagattccatgagcttgaggccatcattctgcgggccaag
cagcaggctgttcgagaggatgaggagagcaatgagaatgacagtgatgacacagaccta
cagatcttctgtgtctcctgtgggcaccccatcaacccacgtgttgccttgcgccatatg
gagcgctgctatgccaagtatgagagccagacgtcctttgggtccatgtatcccacacgc
attgaaggggccacacgactcttctgtgatgtctacaatcctcagagcaaaacatactgt
aagcggctccaggtgctatgtcctgagcactcacgggaccccaaagtgccagctgatgag
gtctgtggttgcccccttgtacgcgatgtctttgagctcacaggtgacttctgccgtctg
cccaagcgccagtgcaatcgccactactgttgggagaagctgcggagggctgaagtggac
ttggagcgagtgcgggtgtggtacaagctggatgagctgtttgagcaggagcgcaatgtt
cgcacagccatgacaaaccgggcagggttgctggccctgatgctgcaccaaacgatccag
catgacccactaacaactgacctgcgctccagtgccgaccgctga
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