Perognathus longimembris pacificus (Pacific pocket mouse): 125364052
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Entry
125364052 CDS
T08928
Symbol
Tgif1
Name
(RefSeq) homeobox protein TGIF1 isoform X1
KO
K19383
homeobox protein TGIF1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
125364052 (Tgif1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125364052 (Tgif1)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125364052 (Tgif1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Homez
Motif
Other DBs
NCBI-GeneID:
125364052
NCBI-ProteinID:
XP_048219423
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All DBs
Position
15:3937058..3944663
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AA seq
270 aa
AA seq
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MKSKKGVVAASGSETEDEDSMDIPLDLSSSTGSGKRRRRGNLPRESVQILRDWLYEHRYN
AYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLPDMLRKDGKDPNQFTISRRGAKVSEA
SSVEVAMGIKNFMPALEESPFHSCTAGPNPTVVGGPLSPKPTSPGPVLARPSVICHTTVT
ALKDGPLSLCQPVSVGHNTDLQQRAASSFTDTSLVYPEDACKSTHTQSGLFNTPPPTPPD
LNQDFSGFQLLVDVALKRAAEMELQARLAA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaagaaaggtgttgttgcagcatctggcagtgagactgaggatgaggacagc
atggacatccccctggacctctcttcctcaactggctcaggcaagaggagaaggcggggc
aacctgcccagggagtccgttcagattctccgagactggctgtatgagcaccggtacaat
gcctatccttctgagcaggaaaaagcattactgtcccagcagactcacctatccacactc
caggtgtgtaactggttcatcaatgcccgccgccggctccttccagacatgctgagaaag
gatggcaaagatcccaatcagttcacaatctctcgccgtggggccaaagtttcggaagcc
agctctgtggaggttgccatgggcatcaagaacttcatgccagctctagaggaaagccca
tttcattcctgcacagccggacccaacccaactgtggtagggggaccactgtctccaaaa
cccacatccccgggacccgtcttggctcgtccatccgtcatctgccataccacggtgact
gcactgaaagacgggcctctgtctctctgccagcccgtcagtgtgggacacaacacagat
ctccagcagagagcagccagcagtttcacagacacctcactcgtgtacccagaagatgct
tgtaaaagtacacacacacagagtggtcttttcaacactcccccccctactccgcctgac
ctgaaccaggattttagtggatttcagcttctagtggatgttgcactcaagcgggctgcg
gagatggagcttcaggccaggcttgcagcttaa
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