Perognathus longimembris pacificus (Pacific pocket mouse): 125364133
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Entry
125364133 CDS
T08928
Symbol
Lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop04820
Cytoskeleton in muscle cells
plop05145
Toxoplasmosis
plop05146
Amoebiasis
plop05165
Human papillomavirus infection
plop05200
Pathways in cancer
plop05222
Small cell lung cancer
plop05410
Hypertrophic cardiomyopathy
plop05412
Arrhythmogenic right ventricular cardiomyopathy
plop05414
Dilated cardiomyopathy
plop05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125364133 (Lama1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125364133 (Lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125364133 (Lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125364133 (Lama1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125364133 (Lama1)
09162 Cancer: specific types
05222 Small cell lung cancer
125364133 (Lama1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
125364133 (Lama1)
09174 Infectious disease: parasitic
05146 Amoebiasis
125364133 (Lama1)
05145 Toxoplasmosis
125364133 (Lama1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
125364133 (Lama1)
05412 Arrhythmogenic right ventricular cardiomyopathy
125364133 (Lama1)
05414 Dilated cardiomyopathy
125364133 (Lama1)
05416 Viral myocarditis
125364133 (Lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
125364133
NCBI-ProteinID:
XP_048219539
LinkDB
All DBs
Position
15:complement(6807853..6955859)
Genome browser
AA seq
3079 aa
AA seq
DB search
MHGGARLALLASLLWVSVQGSPRGLFPAILNLASNAHISANATCGERGPEMYCKLVEHVP
GRPVRNAQCRLCDSNSTNPRESHPISHAIDGTNNWWQSPSIQNGREYHWVTITLDLQQVF
QVAYVIIKAANAPRPGNWILERSVDGITFSPWQYYAVSDSECLTRYNIIPRRGPPTYRAD
DEVICTSYYSRLVPLEHGEIHTSLINGRPSADDLSPRLLEFTSARYIRLRLQRIRTLNAD
LMTLSHRDPRDLDPIVTRRYYYSIKDISVGGMCICYGHASSCPWDATAKQLRCQCEHNTC
GEHCDRCCPGYHQQPWRPGTISSGNTCEECNCHNKTNDCYYDENVAKQRKSLNTAGKFEG
GGVCIDCQQNTTGVNCETCIDGYYRPHKVSPYEDEPCQPCDCDPVGSVSPICIKDDLHSD
LQSGKWPGQCPCKEGYAGERCDRCQFGYRGFPSCVRCECSLAGSVNPDPCTEPCLCKENV
EGENCDRCKPGFYNLKEGDPQGCTECFCFGVSDVCNSLSWPFGQVSNMSGWLITDLISPH
KIQCQQDRLGGHWQISINNTAVLNRLGPKYYWSAPEAYLGNKLTAYGGFLRYTVSYDIPV
DTVDSGLTSHIDVIIKGNGLTLSTQGEGLSLQPYEEYFNVIRLVPENFRDFHNRKEIDRD
QLMTVLANVTHLLIRANYNSAKMALYRLNSVSLDTASRNAIDLAVATDVEHCECPQGYTG
TSCETCLPSYYRVDGILFGGICQPCECHGHASECDIHGVCLACAHHTTGNHCEQCLPGFY
GVPSRGTPEDCQPCACPLYTASNNFSPTCHLTDEDEVLCDQCAPGYSGVWCERCADGYYG
NPTVPGETCVPCDCNGNVDPSEAGHCDSVTGECLKCVGNTNGTHCERCADGFYGDAVTAK
NCRACDCHENGSLSGVCNIDTGLCDCKAHVTGQQCDQCLPGYYGLNLGLGCQPCNCSETG
SMSDDCTDEGQCHCLPGVAGKKCDRCSRGFFGYQDGRCTPCNCAHTQNNCDPVSGECLCP
PHTRGPTCQECEDGYWGQDLKMGCQACNCSHEGSTSSQCDMRSGQCHCKAKFSGQNCGQC
SLGYRDFPACVSCDCNLRGTRADTCDPEHGLCSCAEETGACTCKDNVVGLQCSVCGSGTF
GLSADDPLGCTPCFCFGLSQLCSELEGYVRTPVTLASDQPILRVVSKTDLWGTTTGVHFQ
SPDILLDAETVRQHLRSEPFYWRLPNQFQGDQLLAYGGKLLYSVAFYSSTGTGPSNYEPQ
VIIRGGQTRKLHIHVDEPAPKNGVREDRAVAMHENSWKYFDTVFEKTVTRSDFMSVLSNI
EYILIKASYGQGLQQSRISNISLEVGRKAGELWPMGEAASRLESCVCPPGTTGFSCQDCA
PGYYRGKLPDVHGTGPPPLLAPCVPCSCNNNSDSCDPETGKCLNCRGNTTGDHCDVCAPG
YYGKVTGSARDCSPCACPHHPPASFSPTCVLEGAGGFRCDACAPGHEGQFCERCSTGYYG
NPQAPGGRCQKCDCNSNGSVHSNCDRSSGQCVCKPGHAGLRCEECQPRHLLVESHCVSCD
DECVGALLNDLDNISHAILSVNLTGMFPAPYGNLSDLENKTQYFQGYFLKKNTQMNWTVV
QLDGIAEETDNLQKELTRVLTDSQQVNKATERIFNQSQNLATFIELLLKNGKEILEKAAT
LNQTTDEDLQLHSATLQNLKQSILSLLEGIRKRNFTQVHENVTHELRAAKDLLSEIQKTF
QKPQKELEVFLEATRHHLAEHSSELQALDELLREAETKTQDSNRLLHVVEANLGTFRNET
LRVQEEQNVTSKLVVEGSRLVDAATTQADAVQNLVEELGNHWDEVLLWTAKLRQHVDNLV
MQMSKRGAIPLVHRAEDHAAELQRLAGALDSGLENVRDVSLNATRAAYVYSNIQKLLQQA
EQLANDAQSTGDKTSQVAESLASRSKVYLQRSSRFLQQSSNLSGKQQGVTLWLSKLKNMT
NRFQENADKIARQTNASLLILREIPEDLRDRRNKTEELASSANHSAGRTLQEVLRLSRKV
FNTSTDLSRVNRTLQETKELLQDSSMTTLLAGRKVKDMESQANLLWERLKPLKTLEENLS
RNLSEIKLLISQARKQAASIRVAVAADRDCIRAYQPQISSTNYNTLTLNVKTQEPDNLLF
YLGSSSSSDFLAVEMRRGKVAFLWDLGSGSTRLEFPDVLHDDQWHTVHISRFGNIGSLSV
TEMSSTQNPPMKTSKSPGTAKVLDINNSTRMFVGGLGGQIKKSPAVKVTHFKGCMGEAFL
NGKSIGLWNYVEREGACHGCYGSPQNEDASFYFDGSGYSVVEKTLRTTVTQIVMLFNTFS
PNGLLLYLASNGTKDFLSMELVQGRVKVMVDLGSGPLTLITDRRYNNGTWYKIVFQRNRK
QGLLAVFDAYDSSDKETKQGEAPGASTDLNRREKDLIYVGGLPRSRLVRKGVTSQNYAGC
IKNLEISRSTFDLIRNSYGVRKGCVLEPIRSVSFLRSGYLELPPKPLSPESQFMATFATK
NSNGIILAALDKNMKRPDRLPGQVPFFAIMLIQGHVEVHVSLGDGSSLRKALLHAPSGSY
SDGDQHSISLVRNQRIITVQMDENNPVEMQLGSLAESRTMNMSHLYIGGLPEGEETSMFN
MRHSFHGCIKNLVFDTELVAFTDAKGYEQADLDTCLLVEGPMSALHGKDSEVLPEPPTLP
QPSQCAVDVTSGYVSGAHQFGLSPGSHLVLPFNQSAVRRRLVVQLSIRTFASSGLIYHMA
HENQVDYATLQLHAGRLHFMFDLGKGRTRVSHPALLSDGKWHTVKTEYARRKGFLTVDGQ
EAPAVSTVGDGTMLDVEGKLHLGGLPAQYRARNIGNITHSVPACIREVTVNGRHLNAESP
ESAFAVGRCHEVAQEGTFFEGSGYAAFVKEGYRVRSDLNISLEFRTSFENGVLLGISSAK
VDALGLEMVDGKLLFHVNNGAGRFTATYQPRAGRTLCDGKWHMLQANKSKHRLTLLVDGE
AVGAESPHTQSTSADTHNPIYVGGYPANVKQNCLSSRASFRGCLRKLTLTKGPQVQTFDF
NRAFEQHGVFPHSCPGPEP
NT seq
9240 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtggcgcgcggctggcgctcctggcctcgctgctctgggtctccgtgcagggc
agcccgagaggtctgtttcctgccattctcaacctggccagcaatgctcacatcagtgcc
aacgccacctgtggggagagggggcctgagatgtactgcaaactggtggagcacgtgccc
gggcggccggtgcggaatgcccagtgccgcctctgcgacagcaacagcaccaaccccaga
gaaagccacccaatatcacacgcgatagatggcaccaataactggtggcaaagtcccagt
attcagaatgggagagagtaccactgggtcaccatcactctggacttacaacaggtcttt
caagttgcatatgtcatcattaaagcagccaatgcccctcgccctggaaactggatttta
gagcgttctgtggatggcatcacgttcagcccctggcagtactacgcagtcagcgactca
gagtgcttgacccgctacaacataattcccagacgggggccgcccacttacagagcagac
gatgaagtgatttgcacctcctattactccagactggtcccactggaacatggggagatt
cacacgtccctcatcaatgggagaccgagcgctgatgacctctcccccaggctgctggag
ttcacgtccgcacggtacatccgtctacgcttacagcgcatccggacgctcaatgcagat
ctcatgaccctcagccaccgggaccccagagacctggacccgattgtcacaagacggtat
tactactcaataaaagacatatctgttggagggatgtgtatttgctatggccatgctagt
agctgcccctgggatgcaactgcaaagcaactacgatgccaatgtgagcataacacgtgc
ggggagcactgtgaccggtgctgccccgggtaccatcagcagccctggaggcccggcacc
atttcttctggcaacacctgtgaagaatgtaattgtcacaataaaaccaacgactgctac
tatgatgagaatgtcgcaaagcagaggaagagtttgaacacagccggaaagttcgaggga
ggaggggtttgcatcgactgccagcagaacaccaccggcgtcaactgtgagacctgcatc
gatgggtactaccggccgcacaaagtatctccttacgaggacgagccctgccaaccttgt
gactgcgaccctgtggggtctgtcagccccatctgcatcaaggacgatctccattctgat
ctacagagtgggaagtggccaggccagtgcccttgtaaggaaggctatgcaggggagaga
tgtgatcgctgccagtttggctatcggggtttccccagctgtgtccgctgcgagtgcagt
ctggctggcagtgtgaaccctgacccgtgcacggagccatgtctgtgtaaggaaaatgtt
gaaggggaaaactgtgaccgctgtaagccaggattctataacttgaaggaaggagacccc
cagggctgcaccgagtgcttctgcttcggcgtctctgatgtctgcaacagcctttcgtgg
ccctttggtcaggtgagcaatatgtcagggtggttgatcacagatttgatcagtccacat
aagatccagtgtcagcaggatcggctgggaggacactggcagataagcatcaataacact
gcagtcttgaacagactgggtcccaagtattattggtcagcccctgaggcctaccttgga
aataagttgactgcctatggtggcttcctgagatacacagtgtcctacgacattccagtg
gatacggtagacagtggcctcacgtctcacattgacgtcatcattaagggaaatggactc
actctaagtacacaaggtgagggcctatcactgcagccctatgaagagtatttcaacgtg
attagacttgtgcctgagaacttccgagactttcataacagaaaagagatcgatcgcgac
cagctcatgaccgtccttgccaatgtgacacatctcttgattagggccaactacaattct
gcgaaaatggctctttacaggttgaattctgtctctttggacacagcgagccgtaatgct
atagacctggccgtagccacggatgtggagcactgtgaatgtccccaaggctacacgggg
acctcctgtgagacttgcctccccagctactatcgcgtggatggaatactcttcggagga
atctgtcagccctgtgaatgccatggccatgcatctgagtgtgacattcatggagtctgc
ttggcttgtgcacatcacaccactgggaaccactgcgagcagtgcctgccgggcttctat
ggagtgccttcgagagggacccccgaggactgccagccatgtgcctgccctctctacaca
gcctctaacaatttcagccccacctgtcatctcactgatgaagacgaagtactctgtgac
cagtgtgccccaggctactctggagtttggtgcgagagatgtgcagatggttactatgga
aacccaacagtgcccggggaaacctgtgtgccgtgtgactgcaacggcaacgtggacccc
tctgaggctggccactgtgactcagtcactggggagtgtctgaagtgtgtgggaaacacc
aacggcacccactgtgaaaggtgtgccgatgggttctacggtgatgccgtgactgccaaa
aactgtcgtgcctgtgactgccatgaaaacggctccctttctggtgtgtgcaacattgac
acaggactatgtgactgcaaagctcacgtgactggacagcagtgtgaccagtgtctgcct
ggctattatgggttgaacttggggcttggctgccagccctgtaactgcagtgagacaggt
tcgatgtcagatgactgcacggatgaaggtcaatgtcactgcttaccaggtgtagctggg
aaaaagtgtgacaggtgttcccgtggcttctttgggtaccaggatggtcgctgtacaccc
tgcaactgcgctcacactcagaataactgtgatcccgtatctggagaatgcttgtgccct
cctcacacccggggtccaacatgccaggagtgtgaggatgggtactggggccaggacctg
aagatggggtgccaggcctgcaattgcagccacgagggctccaccagttcccagtgtgac
atgcggtctggccagtgccactgcaaggctaagttttctggacagaactgcggccagtgc
tccttgggctaccgagactttcctgcctgtgtgtcctgtgactgcaacctgagaggcaca
cgggcggacacctgcgacccagagcacggtctctgcagctgtgcagaggaaacaggggcc
tgcacctgcaaggacaatgttgtcggtctccagtgcagcgtatgtggatcagggaccttc
ggcctgagtgcggacgaccccctgggatgcacgccctgcttctgctttgggttgtcacag
ctctgctccgagttggagggctacgtgaggaccccagtaacactggcctccgatcagccc
attctgcgtgttgtgtctaagactgacctgtggggcacgaccacgggcgtgcatttccag
tcccccgatatcttgctggatgccgagacagtccgtcagcatctccgctcagagccgttc
tactggcgactgccaaatcagttccaaggagaccagctcctggcctacggaggcaaattg
ctgtacagtgtggccttctactcctctactggcacgggaccctccaattatgagcctcaa
gttatcatcagaggaggccagacccggaagcttcacatccacgtggacgagccagcccca
aagaatggagtgcgggaagaccgggccgtggccatgcacgagaattcttggaagtatttt
gacactgtttttgaaaagactgtcacacgctccgacttcatgtctgttctcagcaatatt
gagtacatcctcatcaaggcatcctatggacagggccttcagcaaagcagaatctcaaat
atttctctggaggttggcagaaaggctggggagctgtggcccatgggggaggccgcctct
cggttagagagctgcgtctgtccccccggcaccaccggattctcatgccaggactgtgcc
cccgggtactacagagggaagcttccagatgttcatggcacaggaccaccccctctgctt
gctccctgtgtgccctgcagctgcaacaacaacagtgactcctgtgacccagaaactggg
aagtgtctgaactgccgaggtaacacaactggtgaccactgtgatgtgtgtgcccctggc
tactacgggaaggtgacaggctccgcgcgggactgctctccatgtgcctgtcctcaccac
ccccctgccagtttcagtcccacctgtgtgttggaaggtgccggtggcttccgttgtgac
gcctgtgccccaggccatgaaggacagttctgtgaaaggtgctccaccggctactatggc
aaccctcaggcgcccggcggccgctgtcagaagtgtgactgcaactccaacggctccgtt
cacagcaactgtgaccgctcatctggccagtgtgtctgcaagccggggcacgctgggctg
cggtgtgaggaatgccagcccaggcacttgctggtggagagccactgcgtttcttgtgat
gatgagtgtgtaggtgcgctgctgaatgacttggataatatcagtcatgccattctctct
gtgaacctcactggcatgttccctgctccttatggaaatttgtcagaccttgagaacaag
actcagtatttccaggggtacttccttaaaaaaaacacccaaatgaactggacagtagta
cagcttgatggtattgcagaagaaacagacaacctgcaaaaggagctcaccagagtgttg
acagacagccagcaggtgaacaaggcaacagagagaatcttcaatcagagtcaaaatttg
gccaccttcattgagctgctgctgaagaacggcaaagaaatccttgaaaaggcagcaact
ctaaaccagactacagatgaagatctccagctacacagtgctactcttcagaatctgaag
cagagcattttgtctttgctggaagggatacggaaaaggaattttactcaagtgcacgaa
aatgtcacccatgaactcagggctgctaaagacttattgtcagaaattcagaagactttc
cagaagccacagaaggagttggaagtgttcttggaagcaaccaggcaccaccttgcagag
cacagcagtgagctgcaggccctggatgagcttctgagggaagcagagaccaagactcag
gatagcaaccgcctgctgcacgtggtcgaggccaacctgggcaccttcaggaatgaaact
ctgcgtgttcaagaagagcaaaatgtgacctcaaagttggttgtcgaaggaagcaggctg
gtggatgctgccactacacaggcagatgctgtacaaaatcttgtagaggagctggggaat
cactgggatgaggttcttctgtggactgccaaactcaggcaacatgtggacaatctggtc
atgcagatgtcaaaaaggggagcgattccgcttgtgcacagagctgaggatcacgccgct
gagctccagaggctagcgggtgctctggacagtggccttgaaaatgtcagagatgtgtcc
ctgaatgccaccagggcagcctatgtctactccaacattcagaagctgctgcagcaagca
gagcaactggccaacgatgcccagagcactggggataagaccagccaggttgcagaatct
cttgcttctcgtagcaaagtgtatctgcagcgcagttccaggttcctacagcaaagcagc
aacctcagtggaaagcagcaaggtgttacattgtggctgagtaaattgaaaaatatgaca
aacagatttcaagagaatgcagacaaaattgccagacagaccaatgcatccctcttgata
ctcagagaaatccctgaagacctaagggacagaagaaacaaaacagaagagctggcctcg
tctgccaaccacagtgcagggagaacattacaggaagtgctgagactaagccggaaggtg
tttaacacctccactgacctgtccagagtgaaccggacattacaagagacaaaggaactc
ctgcaggactcctccatgaccactctgctagctggaaggaaagttaaagacatggaatca
caagccaaccttttgtgggagcggttaaagcctttgaagactttggaagagaatctgagc
agaaacctatcagaaattaaattgctgatcagccaggcccggaaacaggcagcttcgatc
agagttgcggtggctgcagacagagactgtatccgggcctaccagcctcagatttcttct
accaactataacaccttgaccctgaatgttaagacacaggaacctgacaaccttctcttc
taccttggcagcagcagcagttctgacttcttggcagtggagatgcggcgggggaaagtg
gccttcctctgggatctgggttcggggtccaccaggctggaattcccggatgtcctccat
gacgaccagtggcacaccgtccacatcagcaggtttggaaacattggatcactgagtgtg
acagaaatgagctcaactcaaaatccaccaatgaaaaccagcaaatccccgggcactgct
aaggttctggacataaacaattcaacgaggatgtttgttggaggacttggagggcagatc
aagaaatctcctgctgtgaaggtcactcattttaaaggctgcatgggagaagccttcctg
aatggaaagtccatcggcctgtggaattatgtggaaagagagggagcatgccatggctgc
tatggaagcccgcagaatgaagatgcctccttctactttgatgggagtggatattctgtc
gtggaaaagacgctccgcaccactgtgacccagatagtcatgctctttaataccttctca
cctaatggactcctcctttatctggcttccaatggcaccaaagactttttgtccatggag
ctggtccagggcagagttaaagttatggttgacctgggctcaggaccccttactctcatt
acggacagacggtataacaatggaacctggtacaaaattgtcttccagagaaaccggaag
caaggactgctagctgtttttgatgcctatgactccagtgacaaagagaccaagcaaggt
gaagctccaggagcatccacagatctcaaccggcgggaaaaggatttgatttatgtgggt
ggattacctcggtcaagactggtaaggaagggtgtcaccagccagaactacgcaggctgt
atcaagaacctggaaatatcaaggtcgacctttgatttgatccgcaattcttatggagtg
aggaaaggctgcgtgctggagcctatccgaagtgtcagcttcctgagaagcggctacctt
gagttgccacccaagcctttatcaccagaatcacaattcatggccacatttgccaccaag
aacagcaacggtatcatcctggcagctctggacaagaatatgaagaggccagaccggctt
ccagggcaggtgcccttctttgccatcatgctgatccaaggccacgtggaagtgcacgtc
agcctcggggacgggagcagcctgaggaaggccctgctgcacgctccctcgggctcctac
agcgacggggaccagcactccatctccttggttcggaatcagagaattatcactgtccag
atggatgagaacaaccctgtggaaatgcagttgggctccctggcagagagcaggacaatg
aatatgtcccacctgtacatagggggccttcctgagggcgaggagacatcaatgttcaac
atgaggcactcgttccatggctgtatcaaaaacctggtctttgacacggaacttgtggct
tttaccgatgcaaaaggctatgagcaagcagacctggacacctgcctgcttgtagaaggg
cccatgtcagcccttcatggcaaagatagtgaggtcctaccagagccccccactttacca
caacctagtcagtgtgcggtggacgtaacttcaggctacgtctccggtgcgcaccagttc
gggctctccccgggcagccatttggtgctgcctttcaaccagtcagcggtgagaaggagg
ctcgtggttcagctgagcatccggacgtttgcctcgagtggtctcatctaccacatggct
catgagaaccaagtggactatgccaccctgcagctccacgccggccgcctccacttcatg
tttgaccttggcaagggccgcaccagggtctctcacccggcgctgctcagcgatggcaag
tggcacacggtcaagaccgagtacgcgagaagaaaaggcttcctgacggtggacggccag
gaggcccctgcagtgagcactgtgggagacgggaccatgctggatgtggaaggaaagctg
cacctgggcggcctccctgcccagtaccgagccaggaacattgggaatatcacccacagc
gttcctgcctgcatccgggaggtgacggtgaatggcaggcatctgaacgccgagagcccg
gagtcggccttcgcggtgggcaggtgccatgaggtcgcccaggaggggactttctttgaa
ggaagtggctacgcagcttttgtgaaagaaggctaccgagtccggtcagatttaaacatc
tcgctggagttccgaacgtcttttgaaaacggcgttctcctgggcatcagcagcgccaag
gtggacgcgctcggcctggagatggtggacggcaagcttttgtttcatgtcaacaatggt
gcgggaaggtttacggccacctaccaaccgagagctggcaggactctgtgcgatgggaaa
tggcacatgcttcaggccaacaaaagcaagcaccggctcacgctgctcgtggatggagaa
gccgttggtgcagaaagtcctcacacccagtccacgtctgcagacacccacaaccccatt
tatgtggggggctacccagccaatgtcaagcaaaattgcctgagcagccgggcctcattc
cgggggtgtctgaggaagctcactctgaccaagggcccccaggtgcagaccttcgatttc
aacagagcctttgaacaacatggagttttccctcattcctgtcctgggcctgagccctga
DBGET
integrated database retrieval system