Perognathus longimembris pacificus (Pacific pocket mouse): 125364185
Help
Entry
125364185 CDS
T08928
Symbol
Myom1
Name
(RefSeq) myomesin-1 isoform X1
KO
K24495
myomesin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125364185 (Myom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125364185 (Myom1)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
125364185 (Myom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
Ig_6
Ig_J_second
C2-set_3
Motif
Other DBs
NCBI-GeneID:
125364185
NCBI-ProteinID:
XP_048219601
LinkDB
All DBs
Position
15:complement(3620624..3779356)
Genome browser
AA seq
1708 aa
AA seq
DB search
MAPRTMSHPAHFLQATENQTLQIGKEMDTLSKLESCFTGVVSFPQGHMMSLPFYQKSHQH
YDLSYRNKDLRTTMSHYQQEKKRSAIYTHGSTAYSSRSSAAHRQEAEASRQMSASSYQQQ
ASQAYSLGATQHSSSEVSRKATAAYDYGYSHGLTDSSLLLEDYSSKLSPKTKRAKHSLLS
GEEKENLASDYMVPIFSGRQVHVSGIADTEEERIKEAAAYIAQRNLLAREEGLVTSKQSR
TSRQGKVSEQALAILQQEEAFEKKSRKVAIREKAEQLSLRKTLEETQTYHGKLNEDHLLH
APEFIIKPRSHTVWEKENVKIHCSVAGWPEPRVTWYKNQVPINVHANPGKYIIESRYGMH
TLEIDTCDFEDTAQYRASAMNVKGELSAYASIVVKRYKGELDETRFHASTMPFSFAVTPF
GYASKFDIHFDDKFDVSFGREGETMSLGCQVVITPEIKHFQPEVQWYRNGAPVSSSKWVQ
THWSGDRATLTFSHLNKEDEGLYTIRVRMGEYYEQYSAYVFVRDADAEIEGAPAAPLDVV
SLDANKDYIIISWKQPAVDGGSPILGYFIDKCEVGTDCWSQCNDTPVKFARFPVTGLIEG
RSYLFRVRAVNKTGIGLPSRVSEPVAALDPSEKARLKSRPSAPWTGQIIVTEEEPTEGIV
PGPPTDLSVTEATQSYVVLSWKPPGQRGHEGIMYFVEKCDAGTENWQRVNTELPVKSPRF
ALFDLAEGKAYRFRVRCSNSAGVGEPSEPTEVTIVGDKLDIPKAPGKIIPSRNTDTSVVV
SWEESKDATELVGYYIESSVVGSGKWEPCNNNPVKGSRFTCHGLATGQNYIFRVRAVNAA
GLSEYSQDSEAIEVKAAIGGGVSPDMCSQLTDVPGRLTDSRGGVHGASLPALQKDALLSS
KPNKPSPSSPSSLGHPEVNKVSETVQEELTPSPPEAAPKGQSKSDSLKKKKDLVEVPSPP
SDITCLESFRDSMVLGWKQPVKTGGAEITGYYVNYREVTDGVPGKWREANIKAVSDAAYK
ISDLKENVVYQFQVSAMNIAGLGAPSAVSKCFKCEEWTIAVPGPPHSLQYSEVRKNSLVL
QWKPPVYTGRTPVTGYFVDLKETSGKDDQWRGLNKAAIQNKYLKVDGLKEGISYVFRVRA
INQAGVGKPSDLAGPVVAETRPGTKEVVVNVDDDGIISLNFECDQMTPKSEFTWSKDYVS
TEDSARLEVESKGNKTKLTFKDLGTDDLGIYSCDVTDTDGIASSYLIDEAEMKRLLALSQ
EHKFPTVPSKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRN
TGIIEMFMEKLQDEDEGTYTFQIQDGKATGHSTLVLIGDVYKKLQKEAEFQRQEWIRKQG
PHFAEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITE
FSKKDAGFYEVILKDDRGKDKSRLKLVDEAFKELMTEVCRKIALSATDLKIQSTAEGIRL
YSFVTYYLDDLKVNWSHNGTDIKFTDRVKSGVTGEQIWLQISEPTPNDKGKYVMELFDGK
TGHQRTVDLSGQAFDEAFAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCTVW
GDPTPEVSWLKNEKPLVSDDHCNLRFESGKTAFFTISGVSTADSGKYGLVVKNKYGSETS
DFTVSVFIPEEEARKAPAEPQKGNKKSK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacggaccatgagccatcctgcccacttcctccaggctacggaaaaccaaaca
cttcagatcggtaaggaaatggacactctttctaaacttgaaagttgcttcaccggggtg
gtctcctttcctcaaggacacatgatgtctttgcctttctatcagaagtctcaccagcac
tatgatctcagctaccgcaacaaggacctacgcaccaccatgagccactaccagcaggag
aagaagcgatcggccatctacacccatggctccacagcctacagcagccgctcctctgcg
gcacaccgccaggaagcagaggcctctcgccagatgtctgcctcctcctaccagcagcag
gcctctcaggcctacagtcttggggccactcaacactcgagttctgaagtcagtcggaag
gcaactgcagcctatgattatggctactctcacgggcttacagattccagtctgctgttg
gaagattactcatccaagttgagccctaaaacaaagagagccaagcacagccttctgtct
ggagaagagaaagaaaatctagcaagcgactacatggtgcctatattttctggacgtcaa
gtgcatgtcagtggaattgcagatacagaagaagaaagaattaaagaagctgctgcttac
atagcccagaggaatcttcttgctcgggaggaagggctggtgacctccaagcaatccagg
acatccaggcagggcaaggtctccgagcaggccttggccatcctgcaacaggaggaagct
tttgaaaagaagtccaggaaagttgcaattcgagaaaaggcggaacagctgtcactgaga
aaaacattagaagaaacccagacatatcatggaaaactgaatgaagaccatcttctgcat
gctcctgagtttatcattaaacctcgttcacacacagtttgggagaaagagaatgtaaaa
atacactgctctgtagcaggctggccagagcctcgcgtcacgtggtataagaatcaagtg
ccaataaatgtgcatgcaaaccctgggaagtatattattgaaagtcgatatggaatgcac
actctggagattgacacatgtgattttgaagatacagctcagtaccgggcatcggcgatg
aatgttaaaggagagctttcagcgtatgcttcgattgtggtaaagagatataagggagag
ttagatgagactcgcttccatgcttccaccatgcctttcagctttgctgtgacccctttt
ggttatgcatccaagtttgacatccactttgacgataagtttgatgtgtcttttgggaga
gaaggagagacgatgagtctgggctgccaggtagtgatcactcctgaaatcaagcatttc
cagccagaggtccagtggtacagaaacggggcacctgtttcttcatcaaaatgggtgcaa
acacattggagtggagatagggcaacattgacattttctcatctcaacaaagaagatgaa
ggcctttacacaatccgtgtgcgaatgggagagtactatgagcaatacagcgcttatgtc
tttgttcgagatgctgacgcagagattgaaggagcccccgctgcacccttggatgtggtg
tccttggatgctaacaaggattacatcatcatctcctggaagcagcctgctgtcgatgga
ggaagccctattctgggatattttatcgataagtgtgaggtaggcacagattgctggtct
cagtgcaatgacacacctgtgaagtttgctcgatttccagtcactggattgatagaaggt
cgttcctacctattccgagttagagctgtgaataaaactggaataggcctaccatctcga
gtctctgagcctgtggctgctctggacccatctgagaaggctagacttaaaagtcgccct
tcagcaccttggactggacagatcattgtcactgaagaggaacctacagagggaattgtt
cctggtccccccacagacctgtctgtcactgaggccactcagagctatgtggtgctaagc
tggaagcccccaggccaacgcggccatgaaggcattatgtactttgtggaaaagtgtgac
gcgggcacagaaaactggcagcgcgtgaacacagagctccccgtgaagtcacctcgcttt
gcgcttttcgacctggcggaggggaaggcctaccgctttcgtgtccgctgttcgaattca
gcgggggtcggtgaaccctcagagccaacggaagtgaccatagtaggggacaaacttgat
attcccaaggcccctggcaaaatcatccctagtcggaacactgatacttcagtggtggtt
tcttgggaggagtctaaagatgccacagagctggttgggtactacatcgagtccagtgtg
gtgggctctggcaagtgggagccctgcaacaacaacccagtgaagggttcccgatttact
tgtcatggactggctactggtcagaattatattttccgggtcagagcagttaatgcagct
ggacttagtgaatattcccaggactcagaagctattgaagtcaaagctgctattggggga
ggagtgtctccagatatgtgctctcaactgaccgatgttcctggtcgactaacagactcc
agggggggtgtgcatggagcctccctgccagccttgcagaaagatgctttgctcagtagc
aaacctaataaaccttcacccagtagcccttccagtctgggccacccagaagtgaataaa
gtaagtgaaacagttcaggaagagctcaccccatcaccaccagaggcagctcctaagggg
caaagtaagtctgactccctgaaaaagaagaaggacctcgtagaggtaccatctccacct
tctgacatcacttgtcttgaaagttttcgtgactcaatggttcttggctggaagcaaccg
gttaagactggtggggcagaaatcactggctattatgtgaactaccgggaggttactgat
ggggtaccaggaaaatggagagaagccaacatcaaggctgtcagtgacgcagcatacaag
atcagtgacttgaaggagaacgtggtatatcagttccaagtgtcagccatgaacatcgca
gggctgggggcgccctctgcagtcagcaaatgcttcaagtgtgaagagtggaccatcgct
gttccaggacccccgcatagtcttcaatacagtgaggtcaggaagaactccctggttctc
cagtggaagcctccagtctacactgggcgcactccggtcactggttactttgtggacttg
aaggaaaccagtggcaaagatgaccagtggcgaggactcaataaagcagccattcaaaac
aagtacctgaaggtggacggcctcaaggagggcatcagctatgtttttcgtgtccgagcc
atcaaccaggccggtgttgggaagccttccgaccttgctggccctgtggtggcggaaaca
cgtccaggaaccaaagaggtggttgtaaacgtggatgatgatggaattatttcgttgaac
tttgaatgtgatcagatgactccaaagtcagaattcacttggtccaaagattatgtatct
actgaggattctgcacgattagaagtggaaagcaaaggcaacaagacaaaactgactttc
aaagacctcgggaccgatgacttaggcatttactcttgcgatgtaacagacactgatgga
atagcatcaagctacctaatagatgaggcagaaatgaaacgtttgcttgctctcagccag
gaacacaagttcccaactgttccatctaaatcagagttggctgttgaaattttggagaag
ggccaggtccggttttggatgcaggctgagaagctgtcaggcaatgccaaagtcaactac
atatttaatgaaaaggaaatttttgagggtccgaaatacaagatgcatattgaccgaaac
actggcataattgaaatgttcatggaaaagctacaggatgaggatgagggaacatacact
ttccagattcaagatggaaaagcaactggtcattctactcttgtcctcattggagatgtt
tataaaaaactccagaaagaagcagaattccagcggcaagaatggatcagaaagcaagga
ccacattttgctgagtatttgagctgggaagtgactggtgaatgtaatgtactattaaaa
tgcaaggtggcaaatattaagaaagaaactcatattgtttggtacaaagatgagagggag
atatccgtggatgaaaagcatgactttaaggacggcatctgcaccctgctgataacagag
ttttccaagaaagatgctggcttttatgaagttatcctaaaagatgaccgaggaaaagat
aagagcagattgaagcttgtggatgaagccttcaaagaactgatgactgaagtatgcagg
aaaatagctttgtctgctactgatctgaaaatccaaagcacagccgagggcatccgactg
tactcttttgttacttactacctggatgatttgaaagttaactggtctcacaatgggact
gatattaagttcacagacagggttaagagtggggtcactggggagcagatctggctacaa
atcagtgagcccactccgaatgataaagggaaatatgtaatggagctctttgatggcaaa
actggacaccagaggacggtagatctttctggacaagcatttgatgaagcgtttgccgaa
ttccagaggttaaaacaagccgccattgccgagaaaaatcgtgcccgggtactgggtggg
ctgcctgacgtggtcaccatccaggagggcaaggctcttaatctcacatgcaccgtgtgg
ggagaccctaccccagaggtctcctggctgaagaatgagaagccactggtctcggatgac
cactgcaacctcaggttcgagtctgggaagaccgcgttcttcaccatctcaggcgtgagc
acggctgattcgggcaagtacggactggtggtgaagaataagtacggctcggagaccagc
gacttcaccgtcagtgtgttcatcccggaggaggaggccaggaaggctccggctgagccc
cagaaaggcaacaagaagtctaagtga
DBGET
integrated database retrieval system
