Perognathus longimembris pacificus (Pacific pocket mouse): 125364193
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Entry
125364193 CDS
T08928
Symbol
Mib1
Name
(RefSeq) E3 ubiquitin-protein ligase MIB1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125364193 (Mib1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125364193 (Mib1)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125364193 (Mib1)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125364193 (Mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Sina_RING
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125364193
NCBI-ProteinID:
XP_048219610
LinkDB
All DBs
Position
15:18805517..18966937
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AA seq
1006 aa
AA seq
DB search
MSNSRNNRVMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDLRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANIVRSGDAVQGAEGGTSQFQVGDLVQVCYDLERIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVSKVASAGSAISNASGERLSQLLK
KLFETQESGDLNEELVKAAANGDVAKVEDLLKRPDVDVNGQCAGHTAMQAASQNGHVDIL
KLLLKQNVDVEAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLD
IQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVGKVDAAWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLSIRNKKGQSPLDLC
PDPNLCKALAKCHKEKVSGQVGSRSPSMISNDSETLEECMVCSDMKRDTLFGPCGHIATC
SLCSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQC
RAVVERRVPFIMCCGGKSSEDATDDISSGNIPVLQKDKDNTNVNADVQKLQQQLQDIKEQ
TMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactcccgcaacaaccgcgtgatggtggaaggggtcggggcccgcgtggtgcgc
ggccccgactggaagtgggggaagcaggacggtggcgagggccatgtaggcaccgtgcgg
agcttcgagagtcccgaggaggtggtggtggtgtgggacaacggcaccgccgccaactac
cgctgttccggggcttatgacctgcgcatcctggacagcgcgcccaccggcatcaagcat
gatggaactatgtgtgacacctgccgccaacaaccaatcattggcattcgatggaagtgt
gcagagtgtacaaactatgacttatgcacagtgtgctatcatggagataaacatcactta
aggcatcgcttttacagaattactacaccaggaagtgagcgggttctgttagagtctcgt
agaaaatctaagaagattacagctagaggaatttttgcaggtgccagagtggtccgagga
gttgactggcagtgggaagatcaagatggaggaaatggacgtaggggaaaggtaacagaa
atccaggactggagtgcatcaagcccacatagtgcagcttatgttctctgggacaatggt
gctaagaacctgtacagagttggctttgagggcatgtctgatctgaagtgtgtccaggat
gccaaaggaggttctttctacagagatcattgccctgtgcttggtgagcagaatggcaac
agaaatcctggtggactgcagattggtgacttggtaaatatagatctggacctagaaatt
gtacagtctttgcagcatggccatggaggatggactgatggaatgtttgagactttaact
acaactggaactgtttgtggcattgatgaagatcatgacattgtagtacagtatccaagt
ggcaataggtggacttttaatcctgctgttctcacaaaagcaaacattgtccgaagtggg
gatgctgtgcagggtgcagaaggaggcacttcacagtttcaagtgggtgatcttgtgcaa
gtttgttatgatctggaaagaattaaacttctacaaagaggacatggggaatgggctgaa
gcaatgcttccaactctaggcaaagttggccgagtacaacagatttattcagacagtgat
ttaaaagtagaagtttgtggaacatcctggacatataatccagcagcagtttccaaggtg
gcatctgcaggatcagccattagcaatgcatctggtgaaagactctctcaactcctgaag
aaattatttgaaacccaagaatctggtgacctcaatgaagaattagttaaggctgctgct
aatggagatgttgctaaagtggaagatttgctaaaaagaccagatgtggatgtaaatgga
cagtgtgctggccatacagctatgcaagctgctagtcaaaatggacatgttgatattttg
aagttacttttgaagcaaaatgtggatgtagaagcagaggataaagatggagatagagca
gttcatcatgctgcttttggagatgaaggtgctgttatagaagtactacaccgaggcagt
gccgatctgaatgctcgaaataagcgccgacagacaccactccacattgctgtcaataaa
ggccatcttcaggttgtgaagactttattggactttggttgccatccgagtctccaggat
tctgaaggtgatacacctcttcatgatgccataagtaaaaaacgtgatgatattctggca
gttcttttggaagccggagcagatgttaccattacaaacaataatggatttaatgctcta
catcatgctgcactaagaggaaatcccagtgcaatgcgtgttttactgtcaaaattacca
agaccatggattgtcgatgagaagaaagatgatggttacacggctttgcatctggctgcc
ctaaataatcatgtagaagtggctgaacttttggtacatcagggtaatgcaaacttggat
atccagaatgtgaaccaacaaactgccctgcaccttgctgttgagcggcagcatacccag
attgttaggcttttggtccgtgcaggtgccaagctagacattcaggataaggatggagat
actcccttgcatgaagctctgaggcatcatactttgtctcaactccgtcagctgcaagat
atgcaagatgtggggaaggtagatgctgcctgggaaccatcaaaaaacacattaataatg
ggacttggtacccagggggcagagaagaagagtgcagcatctattgcttgtttcttggca
gccaatggtgctgaccttagcattcgaaataagaagggtcaatcaccacttgatctctgt
cctgatccaaatctttgcaaagcactggcaaaatgtcataaagaaaaagtcagtggtcaa
gtgggttctcgaagtccttctatgattagtaacgattctgaaaccttagaagagtgtatg
gtatgctcagatatgaagagagatactctttttggaccatgtggacatattgcgacttgt
tctttatgttctccacgtgtcaagaaatgcctcatctgtaaagagcaagtgcagtccagg
acaaagattgaagaatgtgtggtatgctctgataagaaagctgctgttctttttcaacct
tgtggacacatgtgtgcttgtgagaactgtgctagcctaatgaaaaagtgtgtgcagtgc
cgtgcagtggttgaacgaagagtgcctttcattatgtgctgtggagggaaaagctcagaa
gatgccactgatgatatctcaagtgggaatattccagtattgcaaaaggataaggacaat
actaatgtcaatgcagatgtgcaaaagctgcagcaacaattgcaggacattaaggaacag
acaatgtgccctgtgtgtctggatcgtctgaagaatatgattttcctttgtggccatggt
acatgccagctttgtggagaccgcatgagtgaatgtcctatttgtcgcaaggctattgag
cgaaggattcttttgtactaa
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