Perognathus longimembris pacificus (Pacific pocket mouse): 125364271
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Entry
125364271 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 59-like
KO
K12028
tripartite motif-containing protein 59
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125364271
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125364271
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
125364271
NCBI-ProteinID:
XP_048219716
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All DBs
Position
15:complement(863609..864980)
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AA seq
399 aa
AA seq
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MHNFEDELTYPICYSISEDPRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCR
SIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC
LTIGQHHGHPIDDLQSAYLKEKDTPRSLLKQLTDAHWTDITCLIEKLEQKSHSEKMVQSD
KEVVLQYFKELTDILEQKKRXFLTTLCDVGNLMSQEYTPQIERLKEIREQQLELVTMTTS
LQEESPLKFLEKIDDVRQRVQMLKERPLPDVQPVEIQPRVSKVLKEEWNRTEIGKIRKAF
IPEMKISSKRVPCSWPDKDEKEIELFKILNIAIVTLISVILMLILLFNHHIITFLNEITS
ICFSEVSLSIXQSLSNNLHDLQNILCHPFYFLKEFMWGK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcacaattttgaggacgagctaacgtatcccatttgttacagtatttctgaagatcct
cgtgtattaccatgttctcatacattttgtagaaattgtttggaaaacgttcttcaggca
tccggtaatttttatatatggagacctttgcgaattccactcaagtgccctaattgcaga
agtattattgaaattgctccaagtggaattgaatctttacctgttaattttgcattaagg
gctatcatcgaaaagtatcagcaggaagaccatccagatatcgtcacctgccctgaacac
tataggcaaccactgaatgtttattgtctgctggataaaaaattagtttgtggtcattgc
ctaactataggtcaacatcatggtcatcctatagatgaccttcagagtgcttatctgaaa
gaaaaggacacaccacgaagtttgcttaagcaacttactgatgcacattggacagatatt
acttgtcttattgaaaagctagaacagaaatcccattcagagaaaatggtccaaagtgac
aaggaagttgttctccagtattttaaggagcttactgatatattagaacagaaaaaaaga
natttcctaaccactctctgtgatgttggcaatttgatgagtcaagaatatactccacag
atcgaaagattgaaagaaatacgagagcagcagcttgaactggttaccatgaccacatct
ttacaagaagagtctccacttaaatttctagaaaaaattgatgatgttcgccaacgtgtg
cagatgctaaaagaaagaccacttcctgatgtccaacctgttgaaatccagcctcgggta
agcaaagtgctaaaagaagaatggaacagaacggaaattggaaaaattaggaaagctttt
attcctgaaatgaagatttcttctaaaagggtgccctgttcctggcctgataaggatgaa
aaagagattgagctttttaagattttaaatattgctatagtcactctgatttcagtgata
ttaatgttgatactccttttcaaccaccacataataaccttcttaaatgaaataacttca
atatgtttttctgaagtctctttgtctatttaacaaagtttatctaacaatttgcatgat
ttacaaaatatactatgtcaccctttttattttttaaaggaattcatgtgggggaagtag
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