Perognathus longimembris pacificus (Pacific pocket mouse): 125364365
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Entry
125364365 CDS
T08928
Symbol
Bod1l1
Name
(RefSeq) biorientation of chromosomes in cell division protein 1-like 1
KO
K27262
biorientation of chromosomes in cell division protein 1-like 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125364365 (Bod1l1)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125364365 (Bod1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COMPASS-Shg1
Motif
Other DBs
NCBI-GeneID:
125364365
NCBI-ProteinID:
XP_048219787
LinkDB
All DBs
Position
16:53189756..53238045
Genome browser
AA seq
3007 aa
AA seq
DB search
MASNPQPQPPPPAPPPPPPQPQPPPPPPGPVTGPGAGGTGGAGAGAGDPQLVAMIVNHLK
SQGLFDQFRRDCLADVDTKPAYQNLRQRVDNFVANHLATHTWSPRLNKNQLRNNIRQQVL
KSGMLESGIDRIISQVVDPKINHTFRPQVEKAVHEFLATLNHKEEASGSAVPDDEKPDSS
VVTQGVPAPGPSANVASDAMSILETITSLNQEANAARASTETPNAKSSERVSRKLSLQPS
PDLSADKEKMSEDVADQERAVPDSGGETLETALKSEELSDAPCQGEEVKNHTKENSGVVL
LNKDAQQESSDQKNKSTDKAEKKPESNEKGERKKDKKEKIEKKFDHSKRNEETQKVKDEK
QAKDKEVESSKPPSEKNTSKAKTAEGTKEDSSLIDSDVDGLTDITVSSVHTSDLSSFEED
TEEEVVMSDSMEEGEIASDDEEKNKQNKTKAQTSDLNEGKAKSVRHAYVHKPFLYSKYYS
DSDDELTVEQRRQSIAKEKEERLLRRQINREKLEEKRKQKAEKTKSSQAKNQGKSSIDLE
ESSTKNVEPKAPGIKEVLKERKVLEKKVALSKRRKKDSRNIDENSKKKQQSEEDSKETLK
TNEHCEKEKGSSSKELKHAHAKGEPSKPTRRLSESLHSTDENKTESKGEREHKRRTSTPV
VMDGAPEETDTRDGKKQLERSESGTEETQKQKSSLKNEKHPKKDDSEIPHLKTLPKKEVK
SKEKAEKEKTPSEEKLPTKHKYKGDSVQKTGDEAELHSEKGLKVEETIQKQNQQTKVSSD
EKAERKSKHRNERKLSVLGKDGKPVSQYIIKTDENVRKENKKERHISSDKTKAEHKSRRS
SDSKLQKDSSSSKQHGVPAQRRSESYSEDKCETDSTNLESSLKPEDVHKERRRTKSLLDE
KLVLKSKSKSQGKQLKVSETELQESITKQSVTPKPDKEKNTEETDSEKQRKAKVEDRPLE
ESGVDHGLESAASSAHSTQKDSSHRAKLPVTKEKYKGDKDSSASRLERKLSEGHKGRNLK
HSNKDMKKKEENKPDDKDSKEVDSNHEKTRGNGSVVEKKLSRRMSENRRGSLSQEMTRED
KLSGNTVGTPSSSSLLRPKKSGETVSIPEQEPMETDSEAAVENVCEGSKPQDSSHNSSQH
DLGSDHPIKPKTTTVLKDELRTSVVDSKTATAACKSGRGMGITSNPEKRADHNSTLTKKS
HTQHAVSRPNPGEKESAQRGAHDVSVDPEPSLRMLSSALSANNRVQKNLKSTAGPSEEHT
GQEDTALEHSINLNPSPSLSSVTVLPQKESPGSELIPPLSRTVLEGSIASTSLKDPTDTA
NQSLPVRKSEVSRTSYGKESGDDFTVNISGKSSTAGKKHISEDHPATLLDNKQEKVNTSL
ACKSMDMMMENENAGKEAGFVDAAKKEIDLNAELNLKQTAMENDKKDDIAVNPVVGISTE
KDAETDELEHKDLVEMKTLPTDVEKRAENNDINTSAGGDTAPSVSQQRNGKTPKEAVGPG
RTEETSIATSTEEKDKGISLNPVKAVGATTTSLKTGKRGMALPCTSIEADEGFIIGTHPQ
NNPLGVGMEASECTVFAAAEEGGGVVTEGFAESETFLTSTKEGESRECTVAESEDRAAGP
VSADTVKTEVSVNSAVTEEKDDAVTSAGSEEKCDGSSGRDSEIVEGTVICISEVESDGAV
TSAGTEIGAGSASSEDIIGFQGNRTRMDLKKETEGAVTCTGAEGRNDNLVICPATGAEPQ
GEHMVTGADVVQVDNNTPPGTSSIPSRDGSGNDSMEGESAVTSTGITEEDGEGPASCTGL
EDSSEGYAISSETEESGESAMDSTVAKDNTEVPLVATSPCDDEDIVTSTGAKEEDDEGEG
VVTSTGRGNEIGHASTCTGIGEGICESAEGEDSQIGPTVEHVDTEAGATVMSANESNIDS
MSGAQKEIKDMEICSSAKGIVESSVTSAVAAKSDMAPLPEGPMTSAGADPTDSLLGRKEK
GEDSTITTGLVGGSYDVLVSGAVPECEVDHTSLSEKEDEGVITSVEIQECDGRMAATASE
PSTQDSSAGGQSQGKGLMISTSTTNEYTPQVGMAVDTGHSSTLGTEGNVEGAREKMEAFE
APMPSAVSGNENQLTASRREEKDECAMISTSIGEEFEGPISSAVDIKCIESQQPAATTDD
RAKGSARASTEDFEVPMPSAPTEAEHPLASTSKEEKDECALISTSIAEEYEASVSGVSGN
APSLTDGSAVISTSSVEDCEGAVSSAPRKEVHPSAALAEETSDTAMISTSTSEGREAVMV
GVVPVGEDQAPSERAEDSSDAAIISTSTAECVPPGTGLGSQKEKPAAAHAPAGNDLATGK
VKCEAPMPSLMAESNCQHAGPSSGGRDAGPVLPVSTAEGRGRQSLYQPSVGQSQSSALCA
KEKDRHSQDCPGQGPFTPRGQNSSAMLEEKNVTLSAIHSDDKSPEAQVTRDSNSTSCSAE
RVLEKSADSPVHPRGPEQTSAVDPSLSSHHLAAINTGANTADNIPLTKDPAEYPPQPQGL
GDNLESTTSKDSIGQESKTAPSDIAIPPAACHAPPTAPKCEKDLTPKSDHSDRGTAEASA
EKTGHSPGTRKSHHREGNLEATLPACENTCDTGNINVLGVSELTNNLKTETVVPSEEEKN
HEIPAASESPYVGKLSRIAEIQGEYSLEAELLHGENSGAGVNEECNKKSSNKGELSSDRK
DSAETVRDHSVETNPKEVEEEERHVPKRKRKKHCPSSEDELDDNPCVLDSRIAATPRPRS
RAETQDTKEESSRDTEELPKISSKTNSSALQAEEKDELSSSEATGDRTEQNEEDGIKSQE
EDQPIIIKRKRGRPRKYPVETTLKSKDDTKTDTGIVTVEQSPPSSKLKVTQTDESNKETA
NLQERSISNDDNEERPVASVRRRGRKPKRSLTLSDDTDSSEPERKRQKSVSEATEDKKDQ
DSDEEEEEEEDDEPPGATTRSTTRSEAQRSKIQLSPSTKRKREGSPPGARTRGQQRVEEA
PGKKVKR
NT seq
9024 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacccgcagccgcagcctccgccgccggcgccgccgcctcctccgccgcag
ccgcagccgccgccgccgccgccgggccccgtaaccggtcccggcgcggggggcacgggc
ggtgcgggcgcgggcgccggggacccgcagctggtggccatgatcgtgaaccacctcaag
agccaggggctcttcgaccagttccgcagggattgcctggccgacgtggacaccaagcct
gcctatcagaatctcagacagcgtgttgataacttcgtggcaaaccacctagcaactcat
acctggagtcctcgcctcaataagaaccagctaagaaataacattcgacagcaagtgctc
aaatcaggaatgctggaatccggtatcgatcgaattatttctcaggttgtggatccaaag
atcaaccacacattcagacctcaggtagagaaagctgtgcatgagtttttggccacacta
aatcacaaagaggaagcaagtggcagtgccgtcccggatgacgagaaaccagactcctcc
gtcgttacacaaggtgtccctgctcctgggcccagtgctaatgtcgccagtgatgctatg
tcgatcttagaaaccataacttctcttaaccaagaagctaatgctgcccgggcctccaca
gaaacgcccaatgccaagagtagtgagagagtatccaggaagctctcccttcagccaagc
cccgaccttagtgctgacaaagagaagatgtcagaggacgtggctgatcaagaaagggcc
gtacctgactctggaggggaaaccctcgaaactgccctcaagtctgaagaactcagtgat
gctccctgtcaaggtgaagaagttaaaaaccacacaaaagagaacagtggcgtagttctg
ctaaataaggatgctcaacaggaaagcagtgaccaaaagaacaaatccacagacaaagct
gaaaagaaaccagagagcaatgaaaaaggagaaagaaagaaagacaagaaggaaaagatt
gaaaagaagtttgaccactccaaaaggaatgaagagacacaaaaagtaaaagatgagaaa
caagcaaaggacaaagaagtagagagttcaaaacctccttcagaaaagaatactagtaag
gctaaaactgctgaagggacaaaagaagactcctctttgatagattctgatgtggatgga
cttacagacattacagttagttctgttcataccagtgacctttcatcttttgaagaagac
actgaggaggaagttgtaatgtctgatagcatggaggaaggagagattgcatctgatgat
gaagagaagaacaaacagaataaaacaaaagctcaaaccagtgatttgaatgaaggaaaa
gcaaaaagtgtgcgtcatgcttatgttcacaaaccatttctgtattcaaagtactatagt
gattctgatgatgagcttactgtagaacagcggcgacagtctattgctaaagaaaaagaa
gagaggctcttaagaaggcaaattaatagagagaaacttgaagaaaaacgaaaacaaaaa
gcagaaaagaccaagtcttctcaagccaagaatcaaggaaaaagtagcatagacttagaa
gagtcatcaacaaagaatgtggaacctaaagcccctggaattaaagaagtccttaaagaa
cggaaggttttagagaaaaaagtagcattaagcaagagaagaaagaaagattcacggaac
attgatgagaattccaaaaagaaacaacagtctgaagaagattccaaagagactctcaaa
acaaatgagcactgtgaaaaggaaaagggatcctcttcaaaggagctcaagcatgcccat
gcaaaaggcgagccaagtaaacctacccggagactttcagaatctttgcattcaactgac
gaaaacaaaactgaatccaaaggagaaagagaacataaaagacggacatctacccccgtg
gtaatggatggggcaccagaagaaactgacaccagagatgggaagaagcaactggaacgc
tcagaaagtggaacagaggaaacccagaaacagaaaagctcacttaagaatgaaaaacat
ccaaagaaagatgactctgaaattccacatttgaaaaccttacctaagaaagaagtaaaa
tctaaagagaaggctgaaaaggaaaaaactccttcagaagaaaaactgcctacaaaacac
aagtataaaggtgacagtgtacagaaaacaggtgatgaggctgaacttcactctgaaaaa
ggtctaaaagtagaagaaactattcagaagcaaaatcagcaaactaaagtatcttcagat
gagaaagcggaacgaaaaagtaaacataggaatgaaaggaaattatcagtattaggcaaa
gatggaaagccagtttctcaatatattataaaaacagatgagaatgtgcgtaaagaaaat
aaaaaagagagacacatatcatctgacaaaactaaggcagagcacaaatccaggagatca
agtgattctaaattgcagaaagattcttccagctccaagcaacatggtgtcccagcacaa
agaagaagcgaaagttactcagaagataagtgtgagacagattcaactaacttagaaagt
agtttaaaaccagaagacgttcacaaagagaggcgacgaacaaagagcttattggatgaa
aaacttgtgttgaagtctaaatcaaaaagtcaaggtaaacaattaaaggtttctgaaaca
gagctacaagaaagtatcacaaaacagtcagtcactccaaaaccagataaggagaagaac
accgaagaaacggattcagaaaaacaacgcaaggctaaagttgaagacagacctttagaa
gaatccggtgttgatcatgggttagagagtgctgcttcttcagcacacagtacacagaaa
gactctagccacagagcaaagttaccagtgacaaaggaaaaatataaaggtgataaagat
tctagtgcctcccgacttgagagaaagttatcagagggacacaaaggcagaaacttaaag
cacagtaataaagacatgaaaaagaaggaagaaaataaaccagatgacaaggacagtaaa
gaagttgacagtaaccatgaaaagactagagggaatggttcggtcgtagaaaaaaaatta
agtagaaggatgagtgaaaatcgaagaggaagcttatcacaagaaatgaccagagaagat
aaattatcaggaaatactgtgggcactccaagtagttcctctcttctgaggccaaaaaaa
agtggtgaaaccgtgtcgattcctgaacaagaaccaatggaaactgattctgaggctgct
gttgaaaatgtatgtgaaggatctaaacctcaagatagcagccataatagttctcagcat
gaccttgggtctgaccatcctataaaaccaaaaacgacgacagttctcaaagatgaatta
agaacttctgtagtagattcaaaaacagcaactgcagcctgtaagtcagggcgtggaatg
ggaattactagcaatcctgaaaagcgtgctgaccataacagcaccttaaccaagaagtct
catactcagcatgctgtgtccagacctaatcctggggagaaagaatctgctcagcgagga
gctcatgatgtgagtgtcgacccggagccaagtctcagaatgttgtctagtgccctgtca
gcaaataatagagtgcagaagaacttgaaaagcacagctggtccctcggaagaacacact
ggtcaagaagacactgctctggaacattccataaacttaaatccctccccatccttaagt
tcagtgactgttttgccgcagaaagaatctcctggttcagaactgattcctcctctgagc
agaactgttttagaaggtagcatagccagcacatcccttaaggatcccactgatactgct
aaccaaagtttgcctgttaggaaatcagaagtctctaggacaagttatggcaaagaaagt
ggtgatgatttcacagtaaatatatcaggaaaatcaagcacagctggcaagaaacacatt
tcagaagatcacccagccactttattagacaataaacaagagaaagtaaatactagtctt
gcttgcaagtcaatggacatgatgatggaaaatgagaatgctggcaaagaagctggcttt
gtggatgcagccaagaaagaaattgacttaaatgcagagcttaatttaaagcagacagcc
atggaaaatgacaagaaggatgacattgctgttaatcctgtagtaggcataagtaccgaa
aaagatgctgaaacagatgaacttgaacataaagatttggttgaaatgaaaacactgccg
actgatgttgagaaaagggctgaaaacaatgacataaacaccagcgctggaggtgacact
gctccctctgtgtctcagcagaggaatgggaaaactccaaaggaagctgttggacctggt
agaaccgaagagacttctattgctactagtactgaagagaaggacaaaggcatctcctta
aacccagtaaaggctgtgggtgctaccaccacttcattaaagacaggaaagaggggaatg
gctttgccttgcaccagcatcgaggcagacgaaggctttataataggtacacatccccaa
aacaatcccctaggggttgggatggaagccagtgagtgcaccgtttttgctgcagccgaa
gaaggtgggggtgttgtcacagaaggatttgcagaaagcgagactttcctcacaagcacc
aaggagggagaaagcagagagtgtactgtggcagaatcagaagacagagcagcaggccct
gtgtctgctgatacagtgaaaacggaagtcagcgtcaacagtgctgtgaccgaggaaaaa
gatgatgccgtaaccagtgcaggttcggaagagaagtgtgatggttcttcaggcagagac
tcagaaatcgttgaggggactgttatttgcattagtgaagttgaaagcgatggagcagtt
acaagtgcagggacagaaataggagcaggatctgcaagcagtgaagacatcattgggttc
cagggaaacagaacacggatggatctcaaaaaagaaacagagggcgctgtgacatgtaca
ggagcagaaggcagaaatgataacttggttatctgcccagcaaccggggccgagccccaa
ggggagcacatggttacaggtgcagatgtggtccaggtagataataacacaccccctggg
acaagctccatccccagcagagatggttctggaaatgacagtatggaaggggagagtgca
gtcaccagcacgggcataacagaagaagatggggaaggaccagcaagttgcactggcttg
gaagacagcagcgaaggctacgccataagttctgagacagaagaaagtggagagagtgca
atggacagcacagttgccaaagataacactgaggtacccttagtagccaccagcccttgt
gatgatgaagacattgtgaccagtacaggtgcaaaagaagaagatgatgaaggggaaggt
gttgtgactagtactgggagaggaaatgaaattggccacgcttcgacttgcacagggata
ggtgaaggaatctgcgagagcgcagaaggggaagatagtcagattggtcctacagtcgag
catgtggacacagaagccggagcgactgtcatgagtgccaatgaaagtaacattgatagc
atgagcggcgcccagaaggaaatcaaagacatggagatctgctccagtgccaaagggatt
gtagagagcagcgtgaccagtgcggttgcagccaagagcgacatggccccacttccagaa
ggccccatgacgagcgcaggtgctgatccaactgatagtctcctggggaggaaggaaaag
ggtgaagatagcactattaccaccggcctggtcgggggcagttacgatgttcttgtgtct
ggggcagtcccggaatgtgaagttgaccacacatccctaagtgaaaaagaagacgagggc
gtcatcacctcggtagaaatccaagagtgtgatggccgcatggccgccacagccagtgag
ccttccacccaagacagctcagctgggggtcaaagtcaaggcaaaggattgatgatttct
accagtacaaccaatgagtacacccctcaggtaggcatggctgtagatacaggacattca
agtactctgggaactgaaggaaacgtggaaggtgccagagaaaaaatggaagcatttgag
gccccgatgcccagtgccgtttcagggaatgagaatcaactcaccgccagcagaagggaa
gaaaaggacgaatgtgccatgatctccacgagcataggggaagagtttgaagggcccatc
tccagcgctgtcgacatcaaatgtattgaaagtcagcagccagccgccaccactgatgac
agagctaaaggctcagcccgggcgagcaccgaggactttgaggtgcccatgcccagtgct
cccacagaagctgaacaccctcttgcctcgaccagcaaggaagaaaaggatgagtgcgct
ctcatttccaccagcatagcagaagagtatgaggcctccgtttccggcgtgagtgggaac
gcaccctctctcacagatgggagtgctgtcatctccaccagctcagtggaagactgtgag
ggagccgtgtccagcgcccctcggaaagaagtccatccctcagctgcactagcagaggag
acaagtgacaccgccatgatttccacgagcacctctgaaggacgcgaagcggtcatggtt
ggcgttgtccccgtgggtgaagaccaggcccccagtgagagggcagaagactcaagcgac
gccgccatcatctccaccagcacggcggagtgtgtgccgccgggcactggcctgggcagc
cagaaagagaagccggcagccgcccacgccccagcaggaaatgacctagccactggaaaa
gttaagtgcgaggctcccatgcccagcctcatggctgagagtaactgtcagcatgccgga
ccatcctcaggaggcagggacgcgggccctgtgctgccagtgagcacagcggaaggccgg
ggcaggcaatccctgtaccagccctctgtggggcaaagccagtcaagtgctctatgtgca
aaagagaaagacagacacagccaggactgccctggccaaggcccattcacaccaagagga
caaaacagtagtgctatgctagaagagaagaatgtaacactgagtgccattcacagtgac
gacaaaagcccagaggcacaggtgacaagggacagtaattcaaccagttgttcagcagaa
agggtcttggagaagagtgctgactcacctgtccatccgagaggaccagagcagacatcg
gcagtagatccctctctcagtagtcaccatttggctgcaataaatactggtgctaacaca
gctgacaacataccactcaccaaagaccctgcagaatatcctcctcagccacagggactt
ggggacaacttggaaagcactaccagcaaggacagtataggccaagaatccaaaactgcg
ccttcagacatagctatccctccagctgcctgccatgcacctccaactgctccgaaatgt
gaaaaggatctaactccaaagagtgatcacagtgacagagggactgccgaagcatctgct
gagaaaacagggcacagtcctggcacaaggaagtcacaccacagagaagggaaccttgag
gccactcttcctgcttgtgaaaatacgtgtgacacaggcaatataaatgttctgggagta
tctgaactgacaaacaacttgaaaacagagacagtggtgccttcagaggaagagaaaaat
catgaaattccagcggcatcagaaagtccctatgtgggaaagctgagtagaatagctgaa
atacagggggagtattcattggaagctgagttactgcatggtgaaaattcaggtgcagga
gtaaatgaagaatgtaataaaaaatcttctaacaaaggagagctatccagtgatagaaaa
gacagcgcagaaactgtaagagatcacagtgttgaaacaaatcctaaagaggttgaagag
gaagaaaggcacgtgccaaaaagaaaaagaaagaagcattgcccttcctcagaagatgaa
ctggatgataacccgtgtgtcctggattccagaatagcagccacgccgcggccgcgttcc
agagccgagacacaagacacaaaggaagagagctccagagatacggaggagttgcctaaa
ataagttccaagacaaacagcagcgctttgcaggctgaagaaaaagatgagcttagcagc
agtgaggccactggtgacaggacggagcagaatgaagaggatggcatcaaatcgcaggaa
gaagatcagccgataattattaaaagaaaaagaggacgacctcgtaaataccctgtagaa
acaacattaaaatcgaaagacgacaccaaaacagatactggcattgtcactgtagaacag
tctccaccgagcagcaagttgaaagtaacacaaacagatgagtccaataaagaaacagcc
aacctacaagaaaggagtataagcaatgatgacaatgaagaaagaccagttgccagcgtg
cgtcggagaggaaggaagcccaagcgttccctcacactgtcagatgacactgactcctca
gagccagagagaaaacgccagaaatcagtttctgaagcaactgaggacaaaaaagatcag
gactccgatgaggaggaggaggaggaggaagatgacgagccccccggtgccaccaccaga
tccaccaccagatcagaggcacagagatcaaagatccagctctcaccttctaccaagcgc
aaaagagaaggcagccctcctggggcccggactcggggccagcagagagtggaggaagcc
cccgggaagaaggtgaagcgataa
DBGET
integrated database retrieval system
