Perognathus longimembris pacificus (Pacific pocket mouse): 125364368
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Entry
125364368 CDS
T08928
Symbol
Abraxas1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1 isoform X1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125364368 (Abraxas1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125364368 (Abraxas1)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
125364368 (Abraxas1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
CC4_CEP85
KIF21A
FlgK_D1
Prefoldin_2
FapA
DUF4709
DUF948
ATG16
DUF1192
Prefoldin
DUF2096_N
DUF16
CCDC39
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
125364368
NCBI-ProteinID:
XP_048219798
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All DBs
Position
16:19290162..19311148
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AA seq
408 aa
AA seq
DB search
MEGESTSAVLSGFMFGALAFQHLNTRADTEGFLLGEVKGEAKNSITDSQMDDVEVVYTID
IQKYIPCYQLFSFYNSVGEVNEHSLKKIFSSTQKNMVGWYKFRRHSDQVMTFRERLLHKN
LQEHFPSQELIFLLLTSSTVTESCSTHKLEYALYKPQKGLFYRIPLVVANLGMSEQMGYK
NVSGSCTSTGFHRAVKAHRSEFFEEDGSLREVHKVNKMYNSLQEELKYVCKNVEQSEKQI
DKLINEINRLKEEIGKKQAQMQALREKKTPGDQQENIFLYQALQTFFPDCELLHSCVISL
TNGQILKSRCSTGHQLYAVDNLTLMVPHTHTPRASPVSSPQLTKRTAAAETDGNQMKRSR
LLEIESKLSKTNTDNEDQEGAFTSSSSDTNEDNEKMKGYGEYPQSPTF
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgagagcacgtctgcggtgctgtcgggcttcatgttcggcgcgctcgccttc
cagcacctcaacacccgtgcggacacggaaggttttctccttggggaagtaaaaggtgaa
gccaagaatagcattactgattcccaaatggatgatgttgaagtggtttatacaattgac
attcagaaatatattccatgctaccagctttttagcttctacaattctgtaggtgaagta
aatgagcactcactgaagaaaatattttcaagtacacaaaagaatatggtaggttggtac
aaatttcgtcgtcattcagatcaggtcatgacatttagagagagactacttcacaaaaac
ctacaggagcactttccaagccaagaacttatttttctgctgttaacatcaagtacagta
acagaaagctgctctactcataaactggaatatgccttatataaacctcaaaaaggactt
ttttacaggatccctttagtggttgccaatctgggcatgtctgaacaaatgggttataaa
aatgtgtctggttcctgtacgtccactggttttcacagagcagtaaaagcacacaggtct
gaattttttgaagaagatggctctttaagggaggtacataaggtaaataaaatgtataat
tcactacaagaagaattaaagtatgtatgcaagaatgtggaacaaagtgagaaacagata
gataaactcataaatgagataaacagattaaaagaagaaattggaaaaaagcaagcacag
atgcaagcgttaagagagaagaaaaccccaggagaccaacaggagaacatttttctctat
caagctttacagaccttttttccagattgtgaacttcttcattcttgtgtgatctccttg
acaaatgggcagattttaaaaagcagatgtagtactggccaccaactatatgcagtagac
aacctgaccttaatggttccgcacacccacacccctagagctagtccagttagctcacca
cagttaactaagcggacagctgctgcagagacagatggaaaccaaatgaagagatcacgg
ttgctggagatagaaagcaagctgtcgaagacaaacactgacaatgaggaccaggaagga
gcattcacatccagcagctcagacacaaatgaagacaatgagaaaatgaagggctatggc
gaatatcctcagtctcccacattttga
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integrated database retrieval system
