Perognathus longimembris pacificus (Pacific pocket mouse): 125364455
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Entry
125364455 CDS
T08928
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125364455 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125364455 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125364455 (Nup54)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125364455 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
125364455
NCBI-ProteinID:
XP_048219992
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All DBs
Position
16:803856..825185
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AA seq
509 aa
AA seq
DB search
MAFNFGTPSGTAGTAAATAAPAGGFGGFGTTSTSAGSAFSFSAPTNTGTTGLFSGTQNKG
FGFGTGFGTATGTSTGLGTGLGTGLGFGGFNTQQQQQQQTTLGGLFSQPTQAPTQSNQLI
NTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGY
SCMPNNKDEDGLVVLVFNKKEADIRNQQQQLVESLHKVLGGNQTLTVNVEGMKTLPDDQT
EVVIYVVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQ
NPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDI
SELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQ
CELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYVDADLLREIKQHLKQQQEGLSHLI
SIIKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcgggactccctcgggcacggccggcaccgccgcggccaccgcggcg
cccgcgggagggtttggaggatttgggacgacatcgaccagtgcaggttctgcattcagc
ttttctgccccaacaaatacaggcactactggactcttcagtggcactcagaacaaaggt
tttggatttggtactggttttggcacagcaacaggaactagtactggtttaggtactggt
ttgggaactggcttgggatttggaggattcaatacacagcagcagcaacagcagcaaact
acgttaggtggtcttttcagtcaacctacacaagctcctacccagtccaaccaactaata
aatactgcaagtgctctttctgctccaacattattgggagatgagagagatgctattttg
gcaaaatggaatcaactgcaagccttttggggaacaggaaaaggatatttcaacaacaat
attcctccagtggaatttacacaagaaaatcccttttgtcgatttaaggctgtaggttat
agttgtatgcccaataataaagatgaagatggtctagtggttttagttttcaacaaaaaa
gaagcagatattcgaaatcaacaacagcagttggtagaatcacttcataaagttttgggc
ggaaaccagacccttactgtaaatgtagagggcatgaaaacactgccagatgatcagaca
gaagttgtcatttatgttgttgagcgttctcctaatggtacctcaagaagagtcccagct
acaacactctatgcccattttgaacaagccaatataaaaacccagttgcagcaacttggt
gtcacactttctatgacaagaacagaactctctcctgcacagatcaaacagcttttacag
aatcctcctgctggtgttgatcctatcatttgggaacaagccaaggtggataaccctgat
tctgaaaagttaatccctgtacccatggtgggtttcaaagaactgctacggagactgaag
gttcaagatcagatgactaagcagcatcagaccagattagacatcatatctgaagatatt
agtgaattacaaaagaatcagactacaaccatggccaaaattgcacagtacaaaaggaaa
ctcatggatctgtcccatagaactttacaggtactcatcaaacaggaaattcaaagaaag
agcggctatgccatccaagctgatgaggagcagctgcgggttcagctagacacaattcag
tgtgaactgaatgcaccgactcagttcaagggccgactaaatgaactgatgtcccagatc
aggatgcagaatcattttggagcagtcaaatctgaagagaggtattatgtagatgcagat
ctgttacgagaaatcaagcagcatttgaaacaacaacaggaaggtcttagccacttgatt
agcatcataaaagatgatctagaagatatcaagttggtagaacatggattgaatgaaacc
atccacatcagaggtggtgtctttagttga
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