Perognathus longimembris pacificus (Pacific pocket mouse): 125364460
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Entry
125364460 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125364460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125364460
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125364460
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Gene cluster
GFIT
Motif
Pfam:
UTP6_C
HAT_PRP39_N
HAT_PRP39_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
125364460
NCBI-ProteinID:
XP_048220007
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Position
16:19587529..19590193
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AA seq
565 aa
AA seq
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MAETIQECIEDRIPELEQLERIGLFCATEIXYEINLLELIQRRRARIRYSFKRDEIEHSI
VQRIYGVFGRASAKWKDDVQLWLSYVVFCKKWGTKAQLSNIVSAMLAIHSNKPALWIMPA
TWEMEDGLSSESARQLFLQALRFHPKCQKLYQEYFRTELMHAEKLRKEKQEFEKAALDMG
DFDQPEEILRDDELARIIYKTSVIKIKGAEFHGSLLSIAWRFDFAKDLQKEIYDGLQALH
TDDPLTSDYVARQELEIKSNSEEQPTRKQAKAVELDQREERCCAVYEEAVKNLPTEAMCK
CYINFCLERFSKNTSRSFLRGKRIESTMNXQAHELKLLSELQYKQWVELLLHQDYRQALG
VAEAGTELFKDSVTMWQLQLQELINSKSPDIAVAFEEAFVYLKPQVCLPLWILWVEWSEG
AKSEEDTEAIFKKALLAVTGASSVTLKTKYLDWAYRSDGYKKARAVFKSLQESRPFSVDF
FRKMMQFEKEQESCRMANLRDSYERVXDLWMDYIKEELNHPLGRAENCGQIYWRATKMLQ
GQSAEMFVAKHAMHQAGHWGREEHG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacaatccaggaatgcatagaagaccgtatccccgaattggaacagctggag
cgcattggactgttctgcgctacggagattnaatatgaaattaatcttttggagctgatc
cagcgaagaagagcacgcatcagatattcatttaagagggatgagattgaacattcaatt
gtacaacggatatatggagtctttgggcgtgcttcagcaaagtggaaagatgatgtacag
ctttggctgtcctatgtagttttttgtaagaaatggggtaccaaagctcaacttagcaac
atagtctctgccatgttggccattcattcaaacaagccagctttgtggattatgccagcc
acctgggaaatggaagatggcttgtcttctgaaagtgcaagacagctctttcttcaggct
ctgcgctttcatcctaagtgccagaaactctatcaggaatactttagaacggagctgatg
catgctgagaaactgaggaaggaaaagcaagaatttgaaaaggctgccttggacatgggg
gattttgatcagcctgaagaaatccttagggatgacgagttggccaggatcatctacaaa
acttctgtaatcaagattaaaggtgccgaatttcatgggtcacttctttccattgcatgg
cgatttgactttgccaaagatctacaaaaagaaatctatgatggccttcaggctttgcac
acagatgaccctctcacctcggattatgtggcacggcaagaattagagatcaaatctaat
tcagaagagcagcctacaaggaaacaagccaaggcagtagagttggaccagagagaggag
aggtgctgtgctgtatatgaagaggcagtgaagaatctgcctacagaggccatgtgcaag
tgttacatcaacttttgtttagaacgattttctaagaatacaagtagatcatttctcaga
gggaagaggatagaaagcaccatgaacnntcaagctcatgaactcaagctcctctcagaa
ttgcaatataagcaatgggttgagttgttgctgcaccaagactataggcaagctctgggg
gtggcagaagctgggactgagctgttcaaggactctgtgaccatgtggcaattgcagctg
caggagctgatcaactcaaagagccctgacatagctgtggcttttgaagaagcctttgtg
tacctgaaaccacaggtttgtcttcccttgtggattttatgggtagaatggagtgaaggt
gccaaaagcgaagaagacacagaagcaatctttaagaaagctcttttagctgtcacaggg
gccagctcagtaacactgaagactaaatacctggattgggcataccgaagtgatggctac
aaaaaggcccgagctgtgtttaaaagtttacaggaaagccgtccattttcagtcgacttt
tttagaaaaatgatgcagtttgaaaaggagcaagaatcctgcagaatggcgaatttaaga
gattcttatgagagggttnttgatctttggatggattacatcaaagaagaattgaatcac
ccccttggtagagctgagaactgtggacagatctattggcgagccacgaaaatgttgcag
ggacagtcagcagagatgtttgtagccaaacatgctatgcaccaggctggccactgggga
agagaggaacatggataa
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