Perognathus longimembris pacificus (Pacific pocket mouse): 125364540
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Entry
125364540 CDS
T08928
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125364540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125364540
Spliceosome [BR:
plop03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125364540
Complex C
U4/U6.U5 tri-SnRNP related factors
125364540
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
125364540
NCBI-ProteinID:
XP_048220090
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All DBs
Position
16:55015448..55016371
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AA seq
307 aa
AA seq
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MANCTVKGAHSIRGTNPQYLVEKIIRTRIYESRYWKEECFGLTAELVVDKAMELRSVGGV
YGANVQPTPFLCLTLKMLQLQPEKDIIVELMKKEDFKYVRLLGALYMRLTGSATDCYKYL
EPLYNDYGTIKRQNRNGECELMHVDEFIDELLHSERVCDLLLPRLQKRRVLEETEQLPPR
VSALEEPVADGQSSEEEEDERLERKPSPVHPRRRYRDLDKPPRSPTLHDRRRRRRRRSPR
RRSWSPHRRSHSPHQERHRSRNPGSHQSRSRDQRHTSRSKSPGHYRRLRHRSHSTSPERS
KSKRWKE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactgtacggtgaaaggagcgcacagcatccgcgggaccaaccctcaatatctg
gtggagaagatcattcggacacgaatctatgagtccaggtactggaaggaagagtgcttt
ggacttacagccgaacttgtcgtggataaagccatggagttgagatctgtcggtggcgtc
tatggtgcaaacgtacaaccaactccctttctgtgtctgaccttgaagatgcttcagctt
caacccgagaaggacattattgttgagttgatgaaaaaggaagatttcaagtatgtccgc
ttgttgggggcactttacatgaggctgacaggctcggcgaccgattgctacaagtatctg
gagcctttgtacaatgactatggaacaatcaagaggcagaaccgcaatggagaatgtgag
ctgatgcacgtggatgagttcatcgatgaactgctgcacagtgagagagtctgtgacctt
cttcttccccggctacagaaacgccgtgtgctagaagagactgagcagctgccacctcga
gtgagtgctctggaagaacccgtggctgatgggcagtccagtgaagaggaagaagacgag
aggctggaaagaaagccctcacctgttcacccccgcagaagataccgagacctggacaag
cccccgagatctcctacactgcacgacaggaggaggaggaggaggaggaggtcacccaga
aggcgaagctggtcaccccatagaagaagccactccccccatcaagaaaggcataggagc
aggaatcccggaagtcaccaaagcaggtcccgagatcaaaggcacacatcccgctccaaa
tctccaggtcactaccgcaggctcagacataggagccactcaacgtctccagaaaggtct
aagagcaagagatggaaggagtaa
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