Perognathus longimembris pacificus (Pacific pocket mouse): 125364730
Help
Entry
125364730 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03082
ATP-dependent chromatin remodeling
plop03083
Polycomb repressive complex
plop04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125364730
03083 Polycomb repressive complex
125364730
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
125364730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125364730
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
125364730
Histone modification proteins
HAT complexes
HATB complex
125364730
HDAC complexes
Sin3A-HDAC complex
125364730
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
125364730
PRC2.2
125364730
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
125364730
Heterochromatin formation proteins
Other heterochromatin formation proteins
125364730
Chromatin remodeling factors
NuRD complex
125364730
NuRF complex
125364730
NuRF complex (fruit fly)
125364730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
CAF1C_H4-bd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_RIG_1st
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
WD40_RFWD3
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
YqbF
Motif
Other DBs
NCBI-GeneID:
125364730
NCBI-ProteinID:
XP_048220334
LinkDB
All DBs
Position
16:25358855..25360314
Genome browser
AA seq
419 aa
AA seq
DB search
MADKEAAFNDAVEERVINEEYKIWKKNTLFLYNLVTHALPSLTEQWLPNVTTPEEKDFSI
HCLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGKFGGFGSVSGKIEIEIKINH
EGEVNRAHYMPQNPCIIATKTPSSIALVFDYTKHPSKPDPSGECNPDLCLSGHQKEGXSW
SPNLSGHLLSASDDHTICLWDIGAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGS
VADDQKLMIWDIRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN
LKLKLHTFESHKDEIFQVQWSPHNETILASSGTDQRLNVWDLSKIGEQSPEDEEDGPPEL
LFIHGGHTAKISDFSWNPNEPWVICSVSENNIMQVWQMEKNIYNDEDPEGSVDPKGQGS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaagcagcctttaacgacgcggtggaagagcgtgtgatcaacgaggag
tacaaaatatggaaaaagaacactctctttctgtacaatttggtgacccatgccctgccc
agcctcactgagcagtggcttcccaatgtgaccacacctgaagagaaagatttcagcatt
cattgccttgtcctggggacacacacatcggatgaacaaaaccaccttgtgatagccagc
gtacagctccccaatgatgatgcacaatttgacgcatcacactatgacagtgagaaagga
aaatttggaggttttggctctgttagtgggaaaattgaaatagaaatcaagattaaccat
gaaggagaagtaaacagggcccattacatgcctcagaatccttgcatcattgcaacaaag
actccatccagtattgctcttgtttttgactacacaaaacatccttctaagccagaccct
tctggagagtgcaacccagatttatgtctcagtggacatcagaaggaaggcntttcttgg
agcccaaatctcagtgggcacttacttagtgcttcagatgaccataccatctgcttatgg
gacatcggtgcagttccaaaggaaggaaaagtggtagatgcgaagaccatcttcactggg
catacagcagtagtagaagatgtttcctggcatctgcttcatgagtctctttttgggtca
gttgctgatgatcagaaacttatgatttgggatattcgttcaaacaatacttccaagcca
agccactcagttgatgctcacactgctgaagtgaactgcttatctttcaatccttatagt
gagttcattcttgccacaggatcagctgacaagactgttgccttgtgggatctgagaaat
ctgaaacttaagttgcatacctttgaatcacataaggatgaaatattccaggttcagtgg
tcccctcacaatgagactattttggcttctagtggtactgatcaaagattgaatgtctgg
gacttaagtaaaattggagaacaatccccagaagatgaagaagatggcccaccagagttg
ttatttattcatggtggtcacactgccaagatatctgatttctcctggaatccaaatgaa
ccttgggtgatttgttctgtatcagaaaataatatcatgcaggtatggcaaatggaaaag
aacatttacaatgatgaagacccggaaggaagtgtggatccaaaaggacagggatcctag
DBGET
integrated database retrieval system
