Perognathus longimembris pacificus (Pacific pocket mouse): 125364777
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Entry
125364777 CDS
T08928
Symbol
Prom1
Name
(RefSeq) prominin-1
KO
K06532
prominin 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
125364777 (Prom1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125364777 (Prom1)
04090 CD molecules [BR:
plop04090
]
125364777 (Prom1)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125364777 (Prom1)
CD molecules [BR:
plop04090
]
Proteins
125364777 (Prom1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Apolipoprotein
DUF1664
DUF7217
ABC2_membrane_3
Nuf2_DHR10-like
DUF3671
ApoLp-III
Fib_alpha
Tweety
DUF898
Cortex-I_coil
SPATA2_PUB-like
RH1
Filament
Tropomyosin
Baculo_PEP_C
DUF2570
Motif
Other DBs
NCBI-GeneID:
125364777
NCBI-ProteinID:
XP_048220416
LinkDB
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Position
16:51781133..51853705
Genome browser
AA seq
861 aa
AA seq
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MALLLGILLLLGLYTKTISGGQPVSTSSPGAFDYELPPIKYETQDNYEAGPISFLFQVVG
LFLHVVQPHDFPVDYLREILEKKSESSVDYQKIAYYEIGIIICAILGLLFVILMPLVGLF
FCMCRCCGKCGGEMHQRQKESGGYQRRCFALSLLVICFLISFGIFCGFVANVHIQTWMNN
TERLASSNFKDLHTFLTETPKQIDFIVAQYTTVRDRSFSDLDRVDSMLGGAILEQLKPEV
VPVLDNVKAMATAMRETREALEDMKNSLRSLSSGSSLLNNSLANVKDSIQDSLDSNDCSS
AQAQETCERIRSSLRDLENTPEWDQLPSVDQKLSSVNEILKTNLDELVSQGSRSLEEIPH
TIKNQTTRAIEDVKSVLNSVGHNIDSVSQQLPIQNMLSSFVDSLNNAESHFYHYKSYMEK
YDPSWWLSSLVICFLVSLIVMFYYLGLLCGVCGYDRKATPTTRGCVSNTGGVFLMTGVGL
SFLFCWILMFLVTFTFVIGANMEKLVCEPYANKKFFEVLDTPYLLNKDWKYYLSGMILGH
SDTELTFEQVYSACKNDKGVYTALKLQKTFNIRDHLNIQQHTGNIVNKFENMKFQLGSIT
LLDDAGRTNLQEFAASGVDQIDFDTYLAQANKSTVKVDLLGFASKLEEDANKLSSGSLRQ
SLKTDAQTIRRIHQQQVLPMEQSLSTLQQSIKMLQRTTNELQNKVAEILFSLDSAQNFIT
NNISSIIAQETKQFVRTITGYFEHYLQWVEVTLSEKMASCKPVTRALDSAISVFLCSYTV
DPLNLFWFGIGKATVLLLPALILAVKLAKYYRQMHSEDIYDNVETVPMKNMENGNNGYHK
DHLYGVHNPVMQAGYDIDSWS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcccttctacttggcatcctactgctgctggggctctatacaaagaccatttccgga
gggcagcctgtgtccacatcctctcctggagctttcgattatgagttgcccccgatcaag
tatgagacacaagacaactatgaagctgggcctatcagtttccttttccaagtggtgggt
ctcttccttcatgtggtgcagccccacgatttcccagtcgattacctcagagaaatcctc
gagaagaaatctgagtcttcagttgactatcagaagattgcctactacgaaatcggcatt
attatatgcgcgatcctgggcctgctgtttgttattctgatgcctcttgtggggcttttc
ttctgtatgtgtcgctgctgtggcaaatgtgggggggaaatgcaccagcggcagaaggaa
agcggaggctaccagaggaggtgctttgcactctccctgttggtgatttgttttctcatc
agctttggcatcttctgtggctttgtggccaacgtgcacatccaaacctggatgaacaat
actgagagactggccagcagcaattttaaagacttgcacacgttcctgactgaaacgcca
aagcaaatcgactttatcgtggctcagtataccaccgtcagggaccggtccttctcagat
ctggacagagttgattccatgctgggaggtgcgattcttgagcagctgaaacctgaagtg
gtcccggttctggataacgtcaaagctatggcgacagctatgagagagaccagggaggcc
ctggaggacatgaaaaacagcttgcggagcctgagtagcgggagttccctgcttaacaac
agcctggccaatgtgaaagacagcatccaggactccctggacagcaacgactgctcttca
gcgcaagcccaggaaacctgtgagcgcatcaggtcctctctaagagatctggagaacacc
cccgagtgggatcagctcccatctgtggatcagaaacttagcagtgtgaatgagattctt
aaaaccaatttggatgagttagtctcacagggatctagatccttggaggagataccccac
acgataaaaaaccaaaccacgcgtgccatagaagatgttaaatcggtcttgaattccgtt
ggccacaacattgacagtgtttcccaacagcttcctattcagaacatgctgtcatctttc
gtagattcccttaacaatgcggagtcccatttctaccattataagtcctacatggaaaag
tatgatccttcctggtggttgagcagcttggtcatctgcttcctggtgagcctcatcgtg
atgttttattacctgggcttgctgtgtggcgtctgtggctatgacaggaaagccaccccg
accaccagaggctgcgtgtctaacacgggaggcgtcttcctcatgactggagttggatta
agtttcctcttttgctggatattgatgttccttgtaacttttacttttgtcattggagca
aatatggaaaaattggtctgtgaaccttatgcaaacaagaagtttttcgaggttttggac
accccctacttactaaataaggattggaaatactatctttctggcatgatactcggtcac
tccgatactgagctcacttttgaacaagtttacagtgcttgcaaaaatgataaaggcgtt
tatactgcacttaagctgcagaaaaccttcaacattcgagatcatctcaacatccagcag
catactggaaacattgtgaacaaatttgaaaatatgaaattccagcttggtagcatcaca
ttgctggatgatgcaggaagaacaaatctccaggagtttgctgcaagtggggtagaccag
atagattttgacacctacctggctcaggctaataaatccactgtaaaagtggatctttta
ggatttgcctctaaactagaagaagatgcaaacaagttgtcctcaggaagtttgaggcag
tccctaaaaacagatgcacaaaccattagaaggattcaccagcaacaagtcctgcccatg
gaacagtcactgagcactttacagcaaagcatcaagatgcttcaacgcaccaccaatgaa
ttgcagaataaagtggccgagatccttttctcattggattctgctcagaacttcatcaca
aataatatatcctctattattgctcaagagacgaagcaatttgtaagaacaataacagga
tactttgaacattacctgcaatgggtggaggtcactctctcggagaaaatggcatcatgt
aaacccgtcaccagggccctggattctgctatcagcgtctttctgtgtagctacaccgtg
gaccctctgaatttgttctggtttggcataggaaaagcaactgtgcttttactcccggct
ctcatcttggctgtcaagttggccaagtactatcgccaaatgcattcagaggacatttat
gacaatgttgagactgtacccatgaaaaatatggaaaatggtaataatggttatcataaa
gatcatttatatggtgttcacaatcctgttatgcaagccgggtacgatattgacagctgg
agctga
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