KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125364832
Entry
125364832         CDS       T08928                                 
Symbol
Aff1
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 1
  KO
K15184  AF4/FMR2 family member 1
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:plop00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    125364832 (Aff1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plop03021]
    125364832 (Aff1)
Transcription machinery [BR:plop03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     125364832 (Aff1)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 125364832
NCBI-ProteinID: XP_048220498
LinkDB
Position
16:complement(16393638..16521207)
AA seq 1277 aa
MAAYSSLYNEDRNLLRIKEKERRNQEIHQEKEAFPEKIPLFGEPYKKAKGDELSSRIQNM
LGNYEEMKEFLSTKSHPQCLAASEDRLGKPRYPSFPDKGGSIPSNSFHTRAHHQPIHTPA
SGPLSVGNISHNPKMAKPRMEPLPNLHAKSYGPPDSQHLAPACLGQEGYSSTHHKKGDPR
PDEGHSTLMTHLAPERELSPFISSLPSPVPPLSPVHSNLQTLPRMQASNKLHSSSNNSKS
SCPAKSAKDLVVKVRDKETPQDNLVAVTSLSVAPPQPASQTFPPPSLPSKSLAMQQKPTA
YVRPMDGQDQAPLSESPKLKSPPEDYRPQTFEKTDLKVPAKTKLTRLKMPSQSVEQMYSS
EVHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPTKDSQHICSAIQNQKQYDTPSKT
HPNSQQGTSMLEDDLQLSDSDDSENEQGTEKPPSSAAPPSAPQLLPEPVVAAHSSSAESE
STSDSDSSSDSESESSSSESENEPLEAPAPEPEPPTTNKWQLDNWLIKVSQPAVPPEGAG
SSEPSHPPLGSKGSGEGSTSQEHPESKDPPSKSSSRAPRLTPEGPHAGKRTCQKSPAQHD
PPPRQTVGTKQPKKAVKVPAQADCRAGQQVPLEPGPPHGAKEQTAKDKPKVKTKGRPRAA
GSRDPKPTAPAPSEKKKHKNGPPTPSKAAAGPVPSKDSVVPLTQSQGPPPGGSHGGRTSG
CQQAVVVQEDGRRDRLLLPLRDTRVLSPLRDTPAPQSLVVKITLSLLTRIPQPPGKGSRA
RKAEEKPPSTGKKSDSEKRCSDGASKGAKKRKGDTERDYENKKIKVEKEVKSQSSSSSSS
HKESSKAKIPKPSSEPSRKEMLPPPPVSSSTSSSSSSSSQKPAKPAHKRSRAEADSGGQD
PPKSASSTKSSSKDASIPKHRKVQGRGPGGSAEPRGFSGDTSTPFPVPSLPNGNAKPGKP
QAKLDKQQADFHMKEAKKLKYKAESMTDKVGKAFKYLEAVLAFIECGVAMESETPAAKAA
YTVYSDTTELIRCTMALKSFSDATLPTQEKIFAVLCMRCQSLLNMAMFRCKKDVAIKYSR
TLNEHFKSSSKAVQAPSPRMARSTGTPSPLSPTPSPASSVGSQSSAGSVGSGGVAAVSTP
LSIQNMTSSYVTITSHVLAAFELWEQAEALSRKNREFFAQLSTKAVPWPSTAAWRSWCST
RDRACSGSSRRPERLSAACGAGARPGDPPCTRRPRDRRGHVSPGDGLDCAAEPGRRAVAA
ARELRGRCSLQWWCGQR
NT seq 3834 nt   +upstreamnt  +downstreamnt
atggcagcctactcgagcttgtacaatgaagacagaaacctgcttcgaattaaggagaag
gaaagacgcaaccaggaaattcaccaagagaaggaggcatttcctgaaaagattcctctt
tttggagagccctacaagaaagcaaaaggtgatgagctgtcaagtcgaatacagaacatg
ttgggaaactatgaagaaatgaaggagttccttagcaccaaatcccaccctcagtgtctg
gctgcttctgaagataggttggggaagccaagatacccttcatttcctgacaaggggggc
agcattccgtctaactccttccacacacgtgcccaccaccagcccattcacactcctgcc
tctggaccactttctgttggtaacattagccacaacccaaagatggcaaagccaagaatg
gaaccattgccaaatctccacgccaaaagctatgggccaccagacagccagcacctggcc
cccgcttgccttggtcaggaggggtacagctccactcatcacaagaaaggggaccccagg
cctgatgaaggccacagtactttgatgacacacttagctccagaaagggaactttccccc
ttcatctcctctttgccttcccctgtgcctcctttgtcacctgtacattccaacctgcaa
acgctacccaggatgcaggcaagcaacaagcttcacagcagtagcaacaacagtaaaagc
tcctgcccagccaagtctgccaaagacctggtagtgaaggttcgggataaagagacccct
caagacaatttggtagcggtcaccagcctcagtgtcgcccctccccagccggcttctcag
acatttccacccccctctctgccatcgaaaagtcttgcaatgcagcagaagcccactgct
tacgtccggcccatggacggccaggatcaggctccgctgagcgagtctcccaagctgaaa
tcaccgccagaagactatcgaccacagacctttgaaaaaacagacttaaaagtgcctgcc
aaaaccaagctcaccaggctgaagatgccttcccagtcagtggagcagatgtactccagt
gaggttcactgtgttgaagaaattctgaaggaaatgacccattcatggcctcctcctttg
acagcaatacatacgcccagtacagcagagccctccaaatttcctttccccacaaaggat
tctcagcacatctgttctgcaatccaaaatcaaaaacaatatgatacaccttcaaaaacc
caccctaattcacagcaaggaacatccatgctggaagatgacctccagctgagtgacagt
gacgacagtgagaatgaacagggcacagagaagcctccttcctcagctgcacctccaagt
gccccccagttgcttccggagccggtggtggcggcccactccagcagcgccgagtcggag
agcaccagtgactcagacagctcctcggactcggagagcgagtctagctccagtgagagc
gagaatgagcccctcgaagccccagctccggagcctgagcctccgacaacaaacaaatgg
cagctggacaactggctgatcaaagtcagccagccagcggtgccccccgagggcgcgggg
agctctgagccctcacacccacccctgggcagcaaggggagcggcgagggcagcaccagc
caggagcacccggaatccaaagaccctccttccaagagctccagcagagccccccggctc
acccccgagggcccccacgccgggaagaggacttgtcagaagtctccagcacagcacgat
cctccgcccagacaaaccgtgggaaccaaacaacccaagaaagctgtgaaggtccccgcg
caggcggactgcagagcgggccagcaggtgcccttggagcccggccctccgcacggcgcc
aaggagcagactgccaaagacaagcccaaggtgaagacgaaagggaggccccgcgccgcg
ggcagcagggaccccaagcccaccgcacctgcccccagcgagaagaagaagcacaagaac
ggcccccccaccccctccaaggccgccgcaggccccgtgcccagcaaggacagtgtggtt
cccctgacccagagccagggcccgccccccgggggcagccacggcggcaggactagtggg
tgccagcaggcggtggtggtccaggaggatggccgcagagacagactgctgttgcccttg
agagacaccagggtgctctcgccgctcagggacactcctgccccgcaaagcctggtggtg
aagataaccctcagccttctgacgcggataccccagccgccaggcaagggaagccgcgcg
aggaaagcggaggagaagccgccgtccaccgggaagaagtctgactctgagaagaggtgt
tcggacggtgccagcaagggggccaaaaagagaaaaggtgacacagaaagagactatgag
aacaagaaaatcaaggtggagaaagaagtcaagtcacagtcttcttcatcttcatcctct
cacaaagaatcttctaaagcaaagatacccaagccttcctcagagccttccagaaaggaa
atgcttccccctccacccgtgtcatcttccacttcctcctcctcctcctcctcctcccag
aagccagccaagcctgcacacaagaggtccagagcggaagcagacagcggtggtcaggac
cctcccaaaagtgccagcagcactaagagcagctcgaaagacgcttccattcccaagcac
aggaaagtgcaggggaggggccccggcggctccgcggagcccagaggattttctggagat
acttctactcctttcccagtgccttctttgccaaatggtaacgctaaaccaggaaagcct
caagcgaagttggacaaacagcaagctgattttcatatgaaggaagccaaaaagttgaag
tacaaagcagagtcaatgacagacaaggtggggaaggcctttaagtacctggaagccgtc
ctggccttcatagagtgcggggtcgccatggagtcggagacgccggcggccaaggcggct
tacacggtgtactcggacaccaccgagctcatcagatgcacgatggcgttaaaatccttc
tctgatgccaccttgccaacacaggagaaaatatttgcagttttatgcatgcgttgccag
tcccttctgaatatggccatgtttcgctgcaaaaaagacgtagcaataaagtattcacgc
actcttaacgagcacttcaagagttcttccaaagcggtccaggcgccttccccgcgcatg
gcaagaagcacaggcaccccgtccccgctttctccaacgccttctcccgccagctccgtg
gggtcgcagtcgagcgccggcagcgtggggagcggcggcgtggcggccgtcagcaccccg
ctctccatccagaacatgacctcgtcctacgtgaccatcacgtcccacgtcctcgccgcc
ttcgagctgtgggagcaggccgaggcgctgtcgaggaagaacagagaattcttcgctcag
ctgagcacgaaagccgtaccttggccctcaacagcagcctggcggagctggtgctctaca
cgagacagggcctgcagcggctcaagcaggcgacccgagcgccttagcgccgcgtgcggg
gccggcgcgaggcctggggacccgccttgcacacggaggcctcgggatcggcgcggacac
gtgtctcctggggacggcctcgactgcgcggcggagcccggacgccgcgcggtcgccgcg
gcaagggagttgcgtggccgctgctcgctgcagtggtggtgcgggcagagatga

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