Perognathus longimembris pacificus (Pacific pocket mouse): 125364880
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Entry
125364880 CDS
T08928
Symbol
Prdm8
Name
(RefSeq) PR domain zinc finger protein 8
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125364880 (Prdm8)
03036 Chromosome and associated proteins [BR:
plop03036
]
125364880 (Prdm8)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125364880 (Prdm8)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125364880 (Prdm8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-LYAR
DUF1835
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
125364880
NCBI-ProteinID:
XP_048220595
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All DBs
Position
16:complement(21958309..21961868)
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AA seq
692 aa
AA seq
DB search
MEDSGIQRGIWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIAL
KSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSARDKEEQNLEAYIKNGQLFYRSLRRI
AKDEELLVWYGKELTELLLLCPSRSHSKMNGSSPYTCLDCSQRFQFEFPYVAHLRFRCPK
RLPSGDLSPPDEQGGGLGTKDHGGGGKEQQQPPPQQPPEASLGPKFCKAGPIHHYPAPSP
ESSAPAANAGGASAKPSTDFHNLARELENSRGGSSSCSPAQSLGSGGAGHQEAELSPDGI
AAGGGGKGKRKFAEEAAEGGGGSGVVGGRARFAERPLPASKEDLVCTPQQYRASGSYFGL
EENGRLFAPPSPETGEAKRSAFVEVKKAARPGGLQPDDVSADGGGPAAEDKDAGGGGGGV
SSAPATASPAGTEKLLAPRPGGPCPALPSRLEGGSPARGSAFTSVPQLGGSGGGAAGGGA
GAGSAGGAAGGQGAGSDERKSAFSQPARSFSQLSPLVLGQKLGALEPCHPGDGVGPTRLY
PAAADPLAVKLQGAAELNGGCGALPSGGGGLPKQSPFLYATAFWPKSSAAAAAAAAAAAA
AGPLQLQLPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYAMEPL
VKRRREEKLKCPICNESFRERHHLSRHMTSHN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcgggaatccagcgaggcatctgggacggagatgccaaggctgtgcaacaa
tgtctaacagatatttttaccagtgtgtacacaacctgcgacatccctgagaatgctata
ttcggcccctgtgttctcagtcacacttctctgtatgacagcatagctttcatagctctc
aagtctaccgacaagagaacagtaccctatatcttccgggtagacacctcagctgcaaat
ggctcctcggaaggtctcatgtggcttcgactggtccaatcagccagagacaaggaagag
cagaacctggaagcgtatatcaaaaacggacagctgttttaccgctctctccgcaggatt
gccaaagatgaggagttactagtttggtacgggaaagaactgactgagttactcttgctc
tgcccctctagatcccacagcaaaatgaatgggtcgtccccttacacgtgcctggactgc
agccaacgtttccagtttgagttcccttacgtggcgcatctgcgtttccgctgccccaag
aggcttcccagcggcgacctgagtcccccggacgagcaaggcggcggcctgggcaccaag
gaccacgggggcggcggcaaagagcagcagcagccgccgccgcagcagcccccggaggcg
tcgctgggccccaagttctgcaaagccggccccatccaccactacccggccccgtccccg
gagagcagcgccccggccgccaatgccggcggcgccagcgccaagccgtccacggacttc
cacaacctcgcccgggaactggagaactcgcgcggaggcagcagcagctgctccccggcg
cagagcctcggcagcggcggcgccggccaccaggaggcggagctgagtcccgacggcatc
gccgcgggcggcggcggcaaagggaagaggaagttcgcggaggaggccgcggaggggggc
ggcggctcgggggtcgtggggggccgggcccgctttgccgagcggcccctgccggcctcc
aaggaggacttggtgtgcaccccgcagcagtaccgcgcgtcgggcagctacttcggtctg
gaagagaacggtcgcctgttcgcgcctcccagccccgagacgggcgaggccaagcgcagc
gccttcgtggaggtgaagaaggcggcgcgccccggcgggctgcagccggacgacgtctcc
gccgacggcgggggccctgcggccgaggacaaggacgccggcggcggcggcggcggcgtc
tcctccgcgcccgccactgcgtcccccgcgggcaccgagaagctgctggccccgcgcccc
ggtggcccttgcccggccttgcccagccggctggaaggcggcagtcccgcgcggggcagc
gccttcacgtcggtgccgcagctgggcggctcgggcggcggcgcggccgggggcggggcg
ggcgcggggagcgcgggaggcgcggccggcggccagggcgcggggtcggacgagcgcaaa
agcgccttctcgcagcccgcgcgctccttctcgcagctgtccccgctggtcctgggccag
aagctgggtgcgctggagccgtgccacccgggcgacggcgtggggcccaccagactctac
cccgccgccgccgatcccctggccgtgaagctgcagggggcggcggagctgaacgggggc
tgcggggccctgccgagcggcgggggcggcctgcccaagcagagccccttcctctacgcc
accgccttctggcccaagagctcggcggccgcggcggcggcggcggcggcggcggcggcc
gcggggcccctgcagctgcagctgccctcggcgctcaccctgctgccgccctccttcacc
tcgctgtgtctgcccgcgcagaactggtgtgccaagtgcaacgcctccttccgcatgacc
tccgacctggtgtaccacatgagatcgcaccacaaaaaggagtacgccatggagcccttg
gtgaagcggcggcgagaggagaaactcaagtgccccatttgcaacgagtccttcagggag
cgtcaccacctctccaggcacatgacctcgcacaattga
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