KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125364960
Entry
125364960         CDS       T08928                                 
Symbol
Pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
  KO
K04363  platelet-derived growth factor receptor alpha [EC:2.7.10.1]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop01521  EGFR tyrosine kinase inhibitor resistance
plop04010  MAPK signaling pathway
plop04014  Ras signaling pathway
plop04015  Rap1 signaling pathway
plop04020  Calcium signaling pathway
plop04072  Phospholipase D signaling pathway
plop04144  Endocytosis
plop04151  PI3K-Akt signaling pathway
plop04510  Focal adhesion
plop04540  Gap junction
plop04630  JAK-STAT signaling pathway
plop04810  Regulation of actin cytoskeleton
plop05163  Human cytomegalovirus infection
plop05200  Pathways in cancer
plop05206  MicroRNAs in cancer
plop05214  Glioma
plop05215  Prostate cancer
plop05218  Melanoma
plop05230  Central carbon metabolism in cancer
plop05231  Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    125364960 (Pdgfra)
   04014 Ras signaling pathway
    125364960 (Pdgfra)
   04015 Rap1 signaling pathway
    125364960 (Pdgfra)
   04630 JAK-STAT signaling pathway
    125364960 (Pdgfra)
   04020 Calcium signaling pathway
    125364960 (Pdgfra)
   04072 Phospholipase D signaling pathway
    125364960 (Pdgfra)
   04151 PI3K-Akt signaling pathway
    125364960 (Pdgfra)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125364960 (Pdgfra)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125364960 (Pdgfra)
   04540 Gap junction
    125364960 (Pdgfra)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    125364960 (Pdgfra)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125364960 (Pdgfra)
   05206 MicroRNAs in cancer
    125364960 (Pdgfra)
   05230 Central carbon metabolism in cancer
    125364960 (Pdgfra)
   05231 Choline metabolism in cancer
    125364960 (Pdgfra)
  09162 Cancer: specific types
   05214 Glioma
    125364960 (Pdgfra)
   05218 Melanoma
    125364960 (Pdgfra)
   05215 Prostate cancer
    125364960 (Pdgfra)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    125364960 (Pdgfra)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    125364960 (Pdgfra)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:plop01001]
    125364960 (Pdgfra)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:plop04090]
    125364960 (Pdgfra)
Enzymes [BR:plop01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     125364960 (Pdgfra)
Protein kinases [BR:plop01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   125364960 (Pdgfra)
CD molecules [BR:plop04090]
 Proteins
  125364960 (Pdgfra)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set ig Ig_2 VEGFR1-3_N_Ig-like VEGFR-1-like_Ig-like V-set C2-set_2 Herpes_gE DUF3475 Kinase-like
Other DBs
NCBI-GeneID: 125364960
NCBI-ProteinID: XP_048220741
LinkDB
Position
16:27566954..27609457
AA seq 1089 aa
MGASRQAFLVFGCLLTGPSLIFCQLSLPSILPNENEKVVQLNSSFTLRCFGESEVSWQYP
MSEEENPSVEIRNEENNSGLFVTVLEVVGASAAHTGLYTCYYNHTQVEESEIEGRHIYIF
VPDPDVAFVPLGMMDYLVIVEDDDSAIIPCRTTDPDTPVTLHNSDGLVPASYDSRQGFNG
TFSMGPYICEATVRGKKFQTIPFNVYALKATSQLDLEMEALKTVYKSGETVVVTCAVFNN
EVVDLQWAYPGEVKGKGITMLEEIKVPTIKLVYTLTVPDATVKDSGDYECTARQATKEVK
EMKKVTISVHEKGFVEIKPTFGLLETVNLHEVKHFVVDVQAYPPPRISWLKDNSTLIENL
TEITTDVEKIQEIRYRSKLKLIRAKEEDSGHYTIVVQNEDDVKSYTFELLTQVPSSILEL
VDDHHGSGGGQTVRCMARGMPLPDIEWMICKDIKKCNNETSWTFLASNVSNILTEIHPRD
KSTVEGRVTFAKVEETIAVRCLAKNLLGTGNRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVVIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFMSHHPEKPKKELDIFGLNPADESTRSY
VILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKN
LLSDDNSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATSEVYEIMVQCWNSEPEKRPSFYHLSEIVENLLPGQYKK
SYEKIHLDFLKSDHPAVARMRIDTDNAYIGVTYKNEEDKLKDWEGSLDEQRLSADSGYII
PLPDIDPVPEEEDLGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDS
SELVEDSFL
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgggggcttcccgtcaggccttcctggtctttggctgtctccttacagggccgagcctc
atcttctgccagctttcattaccctccatccttccaaatgaaaatgaaaaggttgtacag
ctgaattcgtctttcactctgagatgctttggggagagtgaagtgagctggcagtacccc
atgtctgaagaagagaaccccagcgtggaaatccgaaatgaggagaacaatagtggcctt
tttgtgacggtactagaagtggttggggcttcagcagcccacactggattgtacacttgc
tattataaccacactcaggtggaggaaagtgagatcgaaggcaggcacatctacatcttt
gtgcctgacccggatgtggcttttgtgcctctggggatgatggattatttagtcattgtg
gaagatgatgattctgctatcataccctgtcgtactacggacccagatacgcctgtgacc
ttgcacaacagcgatgggctggtgcctgcctcctacgacagcaggcagggtttcaatggg
acattcagcatggggccctacatctgtgaggccactgtccgagggaagaagttccagacc
attccatttaatgtctatgctttgaaagccacatcacaactggatctagaaatggaagct
cttaaaactgtgtataagtcaggggagacggtcgtggtcacctgtgctgtctttaacaac
gaggtggttgaccttcagtgggcgtatccaggagaagtgaaaggcaaaggcatcacgatg
ctggaggaaatcaaagtcccgaccatcaaattggtgtacactttgacagtccccgatgcc
acggtgaaagacagtggagattacgaatgcactgcccgccaggccactaaggaggtcaaa
gaaatgaagaaagtcaccatttctgtccatgagaaagggtttgtggagatcaaacccacc
tttggcctgttggaaactgtcaacctgcatgaagtcaaacattttgtggtggatgtgcag
gcctacccccctcccaggatatcttggctgaaagacaattcaactctgattgaaaatctc
actgagatcaccacagatgtggaaaagatccaggaaataaggtatcgaagcaaattaaaa
ctgatccgtgccaaggaagaagacagtggccattatacaatcgtagttcaaaatgaggat
gatgtgaagagctatacttttgaactattaactcaagtgccttcctccattctggagttg
gtggatgatcaccatggctctggcgggggacagactgtgaggtgcatggccagaggcatg
cctcttcctgacattgagtggatgatctgcaaggacattaagaaatgtaacaatgaaact
tcgtggacatttctagccagcaatgtctctaatatcctcacggagatccatcctcgagac
aagagtaccgtggagggccgagtgacatttgccaaagtggaggagaccattgccgttcgc
tgcctggctaagaatctcctcgggactgggaaccgagaactgaaactggtggcccccacc
ctgcgttctgaactcacagtggcagctgcagttctggtactgttggtgattgtgatcata
tcactgattgtcctggttgtcatttggaagcagaaaccaaggtatgaaattcgctggagg
gtcattgaatcaatcagccctgatggacatgaatatatttatgtggacccgatgcagctg
ccttatgactcaagatgggagtttccaagagatggattggtgcttggtcggatcttgggg
tctggtgcatttgggaaagtggttgaaggaacagcctatggattgagccggtcccagcct
gtcatgaaggtggcagtgaagatgctcaaacccacagccagatccagtgagaagcaagca
ctcatgtctgaactgaagataatgactcacctgggaccgcacttgaacattgtgaacttg
ctgggagcctgtactaagtcaggccccatttacatcatcacggagtactgcttctatggg
gatttggtgaactatttgcataagaatagggatagcttcatgagccaccacccagagaaa
ccaaagaaagagctggacatctttggattgaacccagctgatgaaagcacacgaagctat
gtgattttatcttttgaaaacaacggtgactacatggacatgaagcaagctgacaccaca
cagtatgtccccatgctggaaagaaaagaggtgtctaaatactcagacatccagagatca
ctgtacgaccggccagcctcctataagaagaaatcaatgttagactcagaagtcaaaaac
ctcctctcggatgataactctgaaggccttactctgttggacttgctgagtttcacctat
caagtggcccgtggaatggagtttttggcttcaaaaaattgcgtccaccgggacctggct
gcacgaaatgtcctcctggcacaagggaaaattgtgaagatctgtgattttggcctggcc
agagacatcatgcatgattccaactacgtgtcaaaaggcagtaccttcctgcctgtgaag
tggatggcccctgagagcatctttgacaacctctacaccaccctcagtgacgtctggtct
tatggcattctgctctgggagatcttttctcttggtggcacgccctaccctggcatgatg
gtggattctactttctacaataagatcaagagtgggtaccggatggccaagcctgatcat
gccaccagtgaagtctatgagatcatggtgcaatgctggaacagcgagcctgagaagaga
ccctccttctaccacctgagtgagatagtggagaatctgctacctgggcaatataaaaag
agctatgaaaagatccacctggacttcctgaagagtgaccatcctgctgtggctcgtatg
cgcattgacacggacaatgcatacattggtgtcacctataagaacgaagaagataagctg
aaggactgggaggggagcctggatgagcagagactgagtgcagacagcggctacatcatc
cctctccccgacatcgaccctgttcctgaggaggaagatctgggcaagaggaacagacac
agttcccagacttcagaagagagtgccattgagacaggttccagcagttccaccttcatt
aaaagagaggacgagactatcgaagacatcgacatgatggatgacattggtatagactcc
tcagagttggtggaagacagcttcctgtaa

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